Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00909 ATGGCCACTTCCGCCGCCACAACCGCTGCAGTGTCGCGCCAGCTCTCGCAGAAGAAGCAAGACATCCAAATGATGCTCGCAGCTGAGGTTCATCTCAGAACCAAAAACTGCGACTTCCAGATGGAATGCTACATTTTCAAGCGCCGCAATGATGGTATTTACATAATTAACCTTGGCAAGACATGGGAGAAGCTCCAACTTGCTGCTAGGATTATTGTTGCCATCGAGAACCCTCAGGACATCATTGTTCAGTCTGCTAGGCCATATGGTCAGAGGGCAGTCTTGAAGTTTGCCCAATACACGGGTGCGAATGCAATTGCTGGAAGGCACACTCCTGGAACATTCACTAATCAGATGCAGATATCCTATAGCGAGCCTCGCCTACTCATTCTGACTGATCCAAGGACTGATCATCAGCCCATTAAGGAAGGTGCTCTTGGAAATATTCCAACGATTGCCTTCTGCGACACTGATTCTCCGATGCGCTATGTTGATGTTACCATTCCTGCCAATAACAAGGGGAAGCACTGTATTGGTTGTCTGTTTTGGTTATTAGCAAGGATGGTTCTGCAGATGAGGGGTACTATTCGTCCAGGGCTTAAGTGGGATGTGATGGTGGATTTATTCTTCTATAGAGAACCTGAAGAGGCCAAGCAACAAGAGGATGAGGAATTACTAGCTTCCCCAGAATATGCCATTCAAGATTTTGGTGCTGTTGGCATTGCCAGCTTCCCTGCAGCTGATGGGGAATGGGGGCTGTTACAGCTGAACAATCCTGGACTGAACCAGTTCCTCGACAACCCAGTGTAG 810 0.4815 MATSAATTAAVSRQLSQKKQDIQMMLAAEVHLRTKNCDFQMECYIFKRRNDGIYIINLGKTWEKLQLAARIIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQISYSEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDVTIPANNKGKHCIGCLFWLLARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQQEDEELLASPEYAIQDFGAVGIASFPAADGEWGLLQLNNPGLNQFLDNPV 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00909 269 Gene3D - 21 225 - -
Adu02g00909 269 PRINTS Ribosomal protein S2 signature 22 40 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00909 269 PRINTS Ribosomal protein S2 signature 101 118 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00909 269 PRINTS Ribosomal protein S2 signature 164 178 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00909 269 PRINTS Ribosomal protein S2 signature 143 154 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00909 269 PRINTS Ribosomal protein S2 signature 52 61 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00909 269 PRINTS Ribosomal protein S2 signature 126 143 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00909 269 Pfam Ribosomal protein S2 25 123 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00909 269 Pfam Ribosomal protein S2 125 189 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00909 269 PANTHER 40S RIBOSOMAL PROTEIN SA 10 233 IPR005707 GO:0003735|GO:0006412|GO:0015935
Adu02g00909 269 PANTHER 40S RIBOSOMAL PROTEIN SA 10 233 - -
Adu02g00909 269 ProSitePatterns Ribosomal protein S2 signature 2. 126 150 IPR018130 GO:0003735|GO:0005840|GO:0006412
Adu02g00909 269 SUPERFAMILY Ribosomal protein S2 18 207 IPR023591 -
Adu02g00909 269 CDD RPS2 25 191 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00909 269 TIGRFAM uS2_euk_arch: ribosomal protein uS2 18 213 IPR005707 GO:0003735|GO:0006412|GO:0015935
Adu02g00909 269 Hamap 40S ribosomal protein SA [rps-0]. 9 254 IPR027498 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00909 Adu-Chr2 15740175 15742068 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00909 1 269 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 71.747 7.04e-143 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00909 K02998 - gmx:100786575 429.098