Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00903 ATGGCCACTTCCGCCGCCACAACCGCTGAAGTGTCGCACCAGCTCTCGCGGAAGGAGCAAGACATCCAAATGATGCTCGTAGCTGAGGTTCATCTCGAAAGCAAAAACTGCGACTTCCAGATGGAACGCTACGTTTTCAAGCGCTGCAATGATTGTATTTACATAATTAACCTTGGCAAGACATGGGAGAACCTCCAACTTGCTACTAGGATTATTGTTGCCATCGAGAACCCTCACGACATCATTGTTCAGTCTGCTAGGCCATATGGTCAGAGGGCAGTCTTGAAGTTTGCCCAATACACGGGTGCGAATGCAATTGCTGGAAGGCACACTCCTGGAACATTCACTAATCAGATGCAGACATCCTATAACGAGCCTCGCCTACTCATTCTGACTGATCCAATGACTGATCATCAGCCCATTAAGGAAGGTGCTCTTGGAAATATTCCAACGATTGCCTTCTGCGACACTGATTCTCCGATGCGCTATGTTGATGTTACCATTCCTGCCAATAACAAGGGGAAGCACAGTATTGGTTGTCTGTTTTGGTTATTAGCAAGGATGGTTCTACAGATGAGGGGTACTATTCGTCCGGGGCTTAAGTGGGACGTGATGCGCATTAAGGAAGGTGCTCTTGGAAATATTCCAACGATTGCCTTCTGCGACACTGATTCTCCGATGCGCTATGTTGATGTTACCATTCCTGCCAATAACAAGGGGAAGCACAGTATTGGTTGCTTGTTTTGGTTATTAGCAAGGATGGTTCTGCAGATGAGGGGTACTATTCGTCCAGGGCTTAAAGAATCTGAAGAGGCCAAGCAACAAGAGGAGGAGGAATTACCAACTGCCCCAGTATATGCCATTCAAGATTTTGGTGCTACTGGCATGGCCGGCTTCCCTGCAGCTGATGGGGAATGGGGGGCTGTTACAGCTGAACAATCCTGGACTGAACCAGTTCCTCAACAACCCATTGCAGCTGCACCTGCTAACTTGGCCCCAGACGCCGCTGCAGGTGATTGGAAGCCAGTTCCAGCTCCACAGGCTTCCGTTCCTGCATCCATAGGTGTTGCCCCCACTGGCTGGGAATAA 1089 0.4922 MATSAATTAEVSHQLSRKEQDIQMMLVAEVHLESKNCDFQMERYVFKRCNDCIYIINLGKTWENLQLATRIIVAIENPHDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSYNEPRLLILTDPMTDHQPIKEGALGNIPTIAFCDTDSPMRYVDVTIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMRIKEGALGNIPTIAFCDTDSPMRYVDVTIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKESEEAKQQEEEELPTAPVYAIQDFGATGMAGFPAADGEWGAVTAEQSWTEPVPQQPIAAAPANLAPDAAAGDWKPVPAPQASVPASIGVAPTGWE 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00903 362 PANTHER 40S RIBOSOMAL PROTEIN SA 14 205 IPR005707 GO:0003735|GO:0006412|GO:0015935
Adu02g00903 362 PANTHER 40S RIBOSOMAL PROTEIN SA 14 205 - -
Adu02g00903 362 PANTHER 40S RIBOSOMAL PROTEIN SA 207 352 - -
Adu02g00903 362 MobiDBLite consensus disorder prediction 323 362 - -
Adu02g00903 362 PANTHER 40S RIBOSOMAL PROTEIN SA 207 352 IPR005707 GO:0003735|GO:0006412|GO:0015935
Adu02g00903 362 Hamap 40S ribosomal protein SA [rps-0]. 9 309 IPR027498 GO:0003735|GO:0006412|GO:0015935
Adu02g00903 362 ProSitePatterns Ribosomal protein S2 signature 2. 126 150 IPR018130 GO:0003735|GO:0005840|GO:0006412
Adu02g00903 362 PRINTS Ribosomal protein S2 signature 101 118 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00903 362 PRINTS Ribosomal protein S2 signature 164 178 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00903 362 PRINTS Ribosomal protein S2 signature 143 154 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00903 362 PRINTS Ribosomal protein S2 signature 52 61 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00903 362 PRINTS Ribosomal protein S2 signature 126 143 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00903 362 PRINTS Ribosomal protein S2 signature 22 40 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00903 362 SUPERFAMILY Ribosomal protein S2 202 267 IPR023591 -
Adu02g00903 362 Gene3D - 208 282 - -
Adu02g00903 362 Gene3D - 21 207 - -
Adu02g00903 362 CDD RPS2 25 191 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00903 362 TIGRFAM uS2_euk_arch: ribosomal protein uS2 18 205 IPR005707 GO:0003735|GO:0006412|GO:0015935
Adu02g00903 362 Pfam Ribosomal protein S2 205 255 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00903 362 Pfam Ribosomal protein S2 120 189 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00903 362 SUPERFAMILY Ribosomal protein S2 18 205 IPR023591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00903 Adu-Chr2 15688917 15691681 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00903 174 329 Cytoplasmic Ribosomal Protein Gene Family AT1G72370 49.405 4.80e-33 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00903 K02998 - gmx:100818292 362.459