Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00895 ATGGCGGCGTACGCAGCTATGAAACCTACGAAAGCCGTTTGTTCTGATTTGGTTCGTGGTGCGAAGGACAAGCGCCTCAGGGTGAAGGGACCTGTGAGGATGCCAACTAAGGTTCTTCACATCACTACCAGGAAATCCCCCTGTGGTGAAGGTACCAACACCTGGGACAGATTCGAACTACGTGTTCATAAGAGGGTCATTGACCTCTACAGTTCCCCTGATGTTGTTAAGCAGATTACTTCAATCACAATCGAGCCTGGTGTTGAGGTTGAGGTCACAATTGCAGATGCTTGA 294 0.4932 MAAYAAMKPTKAVCSDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00895 97 PRINTS Ribosomal protein S10 family signature 54 68 IPR001848 GO:0003735|GO:0005840|GO:0006412
Adu02g00895 97 PRINTS Ribosomal protein S10 family signature 32 47 IPR001848 GO:0003735|GO:0005840|GO:0006412
Adu02g00895 97 Gene3D Ribosomal protein S10 domain 4 96 IPR036838 -
Adu02g00895 97 PANTHER RIBOSOMAL PROTEIN S10-RELATED 7 96 - -
Adu02g00895 97 Hamap 30S ribosomal protein S10 [rpsJ]. 2 94 IPR001848 GO:0003735|GO:0005840|GO:0006412
Adu02g00895 97 ProSitePatterns Ribosomal protein S10 signature. 21 36 IPR018268 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Adu02g00895 97 Pfam Ribosomal protein S10p/S20e 12 93 IPR027486 -
Adu02g00895 97 SMART Ribosomal_S10_2 7 93 IPR027486 -
Adu02g00895 97 SUPERFAMILY Ribosomal protein S10 11 94 IPR036838 -
Adu02g00895 97 TIGRFAM uS10_euk_arch: ribosomal protein uS10 9 94 IPR005729 GO:0003735|GO:0006412|GO:0015935
Adu02g00895 97 PANTHER 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER 7 96 IPR001848 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00895 Adu-Chr2 15520012 15521202 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00895 3 97 Cytoplasmic Ribosomal Protein Gene Family AT3G47370 72.727 7.40e-57 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00895 K02969 - gmx:100817306 177.563