Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00894 ATGATCATCAACCGTTCCTCTATGCATGAAACTTGGGACTATTCAAATCTTGTTTCTTTGCCACCTCCAATCCCATCAATCCAATTTCCAATAAAGCCCTCACCAAATGAAAACCAACAAAATGAAACATGTGATTGGGTTGACAACATTGCCAAGCACCTTAGTGTCAATGTTGATGAAGACTTACCACAACAAACAGCTAATGATGATAATCATAATAATAGCTTGTTATTATTGTCCAATAATAATCCTTCATCAATTCACGACCCCAACTTCAATCCAATAAGAAAAAACACTTTTTGGAAAACCCCATTTGATCCTTGCACCAATATTGACCCTCCTAGCACCAATAACTTTGGTCTTCATCAAATTCAATCAAACACCTCAAATTTAGACCATAATATTATTATTAACCACAATAGTAGTAGTAGTAATAATAATAACAATAATATCCATGATCAAGGTTTGAATTTGATTACCCTTCTAATGGAATGTGCTGTGGCAATCTCTGTGGACAACCTTGTTGATGCTCAAAGGATGTTGTTGGAGCTAACACAATTGGCGTCACCTTACAAGGCATCATGTGCTGAAAGAGTTGTTGCATATTTTGCAAAAGCCATGAATAGTAGGGTCATGAATTCTTTTCTTGGTGTGTGTTCACCTTTGATTATTGATCACAAGAGCATTCATTCATCATTCCATGTTTTCAACAATGTTTCCCCTTTCATCAAATTTGCACATTTCACTTCCAACCAAGCAATTCTTGAGGCAGTGAATAGGTGCCAATGCATACACATCATTGATTTGGACATCATGCAAGGCCTTCAATGGCCAGCATTCTTCCACATTCTTGCCACAAGATTTGAGGGTCCACCCGAGGTCACAATGACCGGTATCGGCGCATCCATGGACCTCCTTGTCGAGACGGGGAAACAGCTCTCGAATTTCGCCAGACGGCTTGGAATGCCATTGAAATTCCACCCTGTCGTGGCGAAATTTGGGGAAATTGACGCATCTATGGTGCAAATTAGGTCTTGTGAGACGGTGGCGGTTCATTGGTTGCAACATTCAATGTACGATTCAACCGGGCCGGACTGGATGACCTTGAGACTAATAAAGGAATTGGAGCCAAGAATCATCACATTAGTAGAACAAGATGTAAACAATGGAGGATCATTCTTGGATAGGTTTGTTGGATCATTGCACTACTACTCAACAATATTTGATTCCCTTGGTGCATACTTGGAAATTGATGATCCTAATAGGCACAATGTTGAGCATGGAGTGTTGTCTAGGGAGATCAACAACATATTGGGCATAGGTGGACCATCAAGGAGTGGTGAGGAAAAGTTTATTAGGCAATGGAGGAATGAACTCATTTCAAGGAACAATTGGTTTGTGCAAGTTCCAATGAGTGCTAATTCAATGGCTCAAGCACAATTGATACTTAATATGTTCTCACCACCACATGGTTATAGCCTTGCTCATGTTGATGGCACTTTGAGGCTTGGTTGGAAGGATACTAGCTTGTACACTGCTTCTGCATGGACTTGTAATGCTTTTAGCTAG 1569 0.4015 MIINRSSMHETWDYSNLVSLPPPIPSIQFPIKPSPNENQQNETCDWVDNIAKHLSVNVDEDLPQQTANDDNHNNSLLLLSNNNPSSIHDPNFNPIRKNTFWKTPFDPCTNIDPPSTNNFGLHQIQSNTSNLDHNIIINHNSSSSNNNNNNIHDQGLNLITLLMECAVAISVDNLVDAQRMLLELTQLASPYKASCAERVVAYFAKAMNSRVMNSFLGVCSPLIIDHKSIHSSFHVFNNVSPFIKFAHFTSNQAILEAVNRCQCIHIIDLDIMQGLQWPAFFHILATRFEGPPEVTMTGIGASMDLLVETGKQLSNFARRLGMPLKFHPVVAKFGEIDASMVQIRSCETVAVHWLQHSMYDSTGPDWMTLRLIKELEPRIITLVEQDVNNGGSFLDRFVGSLHYYSTIFDSLGAYLEIDDPNRHNVEHGVLSREINNILGIGGPSRSGEEKFIRQWRNELISRNNWFVQVPMSANSMAQAQLILNMFSPPHGYSLAHVDGTLRLGWKDTSLYTASAWTCNAFS 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00894 522 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 46 518 IPR005202 -
Adu02g00894 522 Pfam GRAS domain family 158 517 IPR005202 -
Adu02g00894 522 ProSiteProfiles GRAS family profile. 149 517 IPR005202 -
Adu02g00894 522 PANTHER OS05G0485400 PROTEIN 46 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00894 Adu-Chr2 15494612 15496205 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00894 153 517 GRAS Transcription Factor Family AT3G54220 51.752 4.10e-127 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Adu02g00894 GRAS 5.1e-99 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00894 - - gmx:100775656 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g00894 02 15494612 15496205 Adu02g00894 02 15494612 15496205 ECH