Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00882 ATGAAGCCCAAAATCGCAGTTAGTCTTGGAGAAAACTCTAGCGCAGTTTTGCTTCGCAGGCCCTCTGAGCCATGTAGACGATCGATCAAGCAGCTTAGGTGGCGGTTGAGCGCAGAAGGGGACGGTGGAGCTGCAGGCGTCGACGGCGACACACACGAGCGAGGAGCGACGAATCAGGCGCATCTGGGAGAGGGAGATTCTTCTCGCCGGGTCAGGTTTCGGAGATCCGGTTATCTTCCGAGCACTGTTTCCATTGATTCAGGGGATTCGAGTTCGAAGATGCTGCCGTCCACCTCGCCAGAGCTCTTCCGAAACCTTACCCTTAATTTAATTCCTTATGCTCCTTCCGTATTTTCGAAACCATACTCAACCAACATGGGTTATTCTGAAACCAATCAGCATGACGAAGAAGCATCCAAGATTCCAGCGTTGCCAACTGATGCACCTAATGATGCAGATGATGATGTGAAATTGAGGTCTAGGGACCAAAGAGAGGCTCTCCTGGGTGAGCCAAAGTGTATCATATGTGGCCGTTATGGTGAGTATATCTGTGATGAAACTGACGATGATGTTTGCAGTTTGGAATGCAAACAATTACTACTAGGCAGAATCGCCAAATCCTTGCCTCCTGTTGGAGGAGTTCTTCAGCTGCCTAAAAAACTACCTGCAGCTGACGAGTGCTTTTATGTTAGAGTTACTGATTGTGATGTAGTGGCGCCAGTTTTGTCATTTGCTTCATGCAATCTCCCTGACAAGCTCCTCCACAATGTAGAAGCAGCGGGGTATGAAATGCCTACCCTTGTTCAGATGCAAGCAATCCCTGCCGCTTTGACGGGAAAAAGCACGCTTGTTCTGGCTGAAACAGGATCTGGAAAAGAGCTTTCTATACAGGTTGAAGAGCATGCAAAGTTGCTTGGAAAGGGGTTACCATTTAAAACTGCCCTTGTGGTTGGTGGTGAGGCCATGGCTAGACAACTCTATCGCTTTCAGCAAGGAGTTGAACTGATTGTGGGAACACCAGGAAGGCTTGTCGATCTTTTAACAAAGCATGAGATCGACTTAGATAATGTGATGACTTTTGTTTTGGATGAAGTTGATTGCATGCTTCAAAGGGGTTTCAGAGATCAGGTCATACAGATATACAGGGCTCTGTCACAACCTCAGGTCTTGATGTATTCTGCAACAATGTCTCATGATTTAGAGAAGATGGCAAACTCTCTTGCGAATGGTGTGTCAGTTATCTCTGCTGGGAAGGTGAATAGCCCAAATAAGGCTGTGAAGCAGGTCGCTATTTGGGTTGAGTCAAAGCAAAAGAAGCAGAAGCTGTTTGAGATATTAAAACCCCTCCCCCAATTTGACCAAGCAGCCACCGAAGAGAGCCCCATCTCCGACGCTAGAGAACCAACCCCCATGAAATCCGCTGAGCTCCCCGTCGCCGTCGCCTGGCCGCCGGACATCCGCACGCCCGTGTGGACCTGTGTCGCACCATACTCATCTCTGAACGCCGCGTCTTATTTGCGTTGTCTGTGTTTATGGTGGTGCAATGGGATTGAGTTCTTGCTGTTTATATATGGTGGGGCTCCATACCAGACTCAGGAGAGTAAGCTTAGGAGAGGCGTTGATATTGTTGTTGGCACTCCAGGTCGCGTGAAGGATCATGTAGAGAGGAAAAATATTGACCTGAGCCAGCTAAAGTTTCATGTCCTTGATGAGGCTAATGAGATGCTCAGAATGGGTTTTGTTGAAGATGTGGAATTAATTCTAAGCAAGAACGAAAAAACTAACCCACTTACCGTGGATGGTCGGCGACGGTCTGGTTATAATGTTCGTGCTGGTCCCGGTGAATGGTCCACGGCAGGCGGCGACACAAGGCGTGGATCCTCAGCTGCGAACCGTGCCACGGGGATGCTTCCAGCCACGGCGTACAAGCGCAAAGACTGGGCGATGCTGGGTGGGTCGGCGGTGACGGATGTGCAAGGGGTTGCCGATGCAGTTCTCGTCGGAGCTGATGCGGGTCGCGAGAATGGCGGGTGCACGGAGGAGGGGTTGGTAACCAGCGACAGTGATGCGGCGAAGGGGGCTGATAACTTGCGAGAAAGGGAGAAACTATTTGAAGGTGCAACTAGTGATGATGTAAAACCAAGACTTAGAACTCCTGAAGAAATTATGGCTACTTATAGAAAAACTGGGGATGCTTCTTCAGCTGCTGCCCAAGCAAGAAATAAGCTTGTGGAGAGGCATTGGAGgagccagtgcaaccttcaaagcctccgtcgcgcaactttcgaaacctccgtcgcgcagcaaccatcGCAACCTTCGAAGCCACCGTCTGCTCCACCACTCTTGCATGCTCTATCTCCCTCGGTGTCTCAGTCTCCCTTGGTCACTCGGTATCTCTGTCTCTATCTCTCGGTGTCTCTGTCCTCCTCCGCAACCACTCTTGCATGTTCTCTAGCACGCAGAAGCAGAAGTGCAGAACGCGAAGCAGCAGTGCAGCAGTTGGAGCTTCTGGCGCAACTTCTGTCAGCCACCGCCGCCGCCGCGCAGTCCGTGAAGCTAACGTCAGTCACCTCTGTTCGCGGCTTCGCGCAGCCACTTTCCGTCGCGCAGTCTGTTTCCCCCTTCCACCCATCAGCCACTGACTTGCCTCTTGCCAGCCACCGTCCCCGCCAGCTCTGCATTTTTTCAGGCTTCCAGCTTCTAACCCTAG 2713 0.4961 MKPKIAVSLGENSSAVLLRRPSEPCRRSIKQLRWRLSAEGDGGAAGVDGDTHERGATNQAHLGEGDSSRRVRFRRSGYLPSTVSIDSGDSSSKMLPSTSPELFRNLTLNLIPYAPSVFSKPYSTNMGYSETNQHDEEASKIPALPTDAPNDADDDVKLRSRDQREALLGEPKCIICGRYGEYICDETDDDVCSLECKQLLLGRIAKSLPPVGGVLQLPKKLPAADECFYVRVTDCDVVAPVLSFASCNLPDKLLHNVEAAGYEMPTLVQMQAIPAALTGKSTLVLAETGSGKELSIQVEEHAKLLGKGLPFKTALVVGGEAMARQLYRFQQGVELIVGTPGRLVDLLTKHEIDLDNVMTFVLDEVDCMLQRGFRDQVIQIYRALSQPQVLMYSATMSHDLEKMANSLANGVSVISAGKVNSPNKAVKQVAIWVESKQKKQKLFEILKPLPQFDQAATEESPISDAREPTPMKSAELPVAVAWPPDIRTPVWTCVAPYSSLNAASYLRCLCLWWCNGIEFLLFIYGGAPYQTQESKLRRGVDIVVGTPGRVKDHVERKNIDLSQLKFHVLDEANEMLRMGFVEDVELILSKNEKTNPLTVDGRRRSGYNVRAGPGEWSTAGGDTRRGSSAANRATGMLPATAYKRKDWAMLGGSAVTDVQGVADAVLVGADAGRENGGCTEEGLVTSDSDAAKGADNLREREKLFEGATSDDVKPRLRTPEEIMATYRKTGDASSAAAQARNKLVERHWRSQCNLQSLRRATFETSVAQQPSQPSKPPSAPPLLHALSPSVSQSPLVTRYLCLYLSVSLSSSATTLACSLARRSRSAEREAAVQQLELLAQLLSATAAAAQSVKLTSVTSVRGFAQPLSVAQSVSPFHPSATDLPLASHRPRQLCIFSGFQLLTL 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00882 904 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 484 591 IPR027417 -
Adu02g00882 904 Gene3D - 486 600 IPR027417 -
Adu02g00882 904 MobiDBLite consensus disorder prediction 598 630 - -
Adu02g00882 904 Pfam DEAD/DEAH box helicase 292 402 IPR011545 GO:0003676|GO:0005524
Adu02g00882 904 MobiDBLite consensus disorder prediction 54 72 - -
Adu02g00882 904 Gene3D - 220 293 IPR027417 -
Adu02g00882 904 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 229 410 IPR027417 -
Adu02g00882 904 Gene3D - 294 429 IPR027417 -
Adu02g00882 904 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 153 292 - -
Adu02g00882 904 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 293 452 - -
Adu02g00882 904 Pfam DEAD/DEAH box helicase 493 592 IPR011545 GO:0003676|GO:0005524
Adu02g00882 904 MobiDBLite consensus disorder prediction 40 72 - -
Adu02g00882 904 PANTHER ATP-DEPENDENT RNA HELICASE DDX59-RELATED 153 292 - -
Adu02g00882 904 PANTHER ATP-DEPENDENT RNA HELICASE DDX59-RELATED 293 452 - -
Adu02g00882 904 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 242 270 IPR014014 GO:0003724
Adu02g00882 904 SMART ultradead3 261 429 IPR014001 -
Adu02g00882 904 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 506 589 IPR014001 -
Adu02g00882 904 Pfam HIT zinc finger 171 197 IPR007529 -
Adu02g00882 904 Gene3D - 152 208 - -
Adu02g00882 904 MobiDBLite consensus disorder prediction 127 154 - -
Adu02g00882 904 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 292 414 IPR014001 -
Adu02g00882 904 MobiDBLite consensus disorder prediction 763 785 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00882 Adu-Chr2 15147640 15160911 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00882 525 584 Eukaryotic Initiation Factors Gene Family AT1G72730 43.333 8.27e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00882 K19466 - gmx:100784491 471.47