Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00868 ATGGGTCTTAGAGATATTGGTGCTTCATTGCCACCTGGGTTTCGGTTCTATCCAAGTGATGAAGAATTAGTTCTTCACTATCTTTACAAGAAGATCACAAATGAGGAAGTTCTCAAGGGTACTTTGATGGAAATTGATTTGCACACATGTGAGCCATGGCAGCTTCCTGAGGTGGCTAAGCTCAATGCAAATGAATGGTACTTCTTCAGCTTCCGTGACCGCAAATACGCCACCGGCTTTCGCACCAATCGCGCCACGACATCTGGCTACTGGAAAGCGACCGGCAAGGATCGTACGGTTCTCGATCCCCTCACCCGCGAGGTCGTAGGGATGCGGAAGACCTTGGTGTTCTACAAGAATAGAGCCCCAAATGGCATCAAAACTGGTTGGATCATGCATGAGTTTCGCTTGGAGACCCCACACATGCCACCTAAGGAGGATTGGGTTTTATGTAGAGTGTTTCACAAGGGCAAAACAGACAATAGTGCCAAACTAAGCCCACAATTCATGTATGAGGCCACACCTTCATCCCTAACTTTGGCTTCATCATCATCATCCCCACCAACAAACCAAACAAATTGCAACAATTTGCATGTTATTGGGTATAACCAACTTCCCAATTTCTCATCATCATCATCACCAATGCCAATCCACCATAATCACCATCATCATCATCATCAAAACCAAAACGGTTCTTCCTCTTTGATGAATCTCCTTCAATTTTCCACTAAGGAAAATAGTACCATTACTCAACTAAGTCCCAAAGGTGGCGGTGGCGGTGACGACGGCGGCTATGGGTTCATGTGGGACATGGATCTTGAGGAAAATAGCTTCCATGATGGTGGGGTTATTGCATCAAACTTGAACGACATGAGATTTGAGGTTGATAATAACACTATGGTTATGTTGTAG 912 0.4507 MGLRDIGASLPPGFRFYPSDEELVLHYLYKKITNEEVLKGTLMEIDLHTCEPWQLPEVAKLNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVLDPLTREVVGMRKTLVFYKNRAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKGKTDNSAKLSPQFMYEATPSSLTLASSSSSPPTNQTNCNNLHVIGYNQLPNFSSSSSPMPIHHNHHHHHHQNQNGSSSLMNLLQFSTKENSTITQLSPKGGGGGDDGGYGFMWDMDLEENSFHDGGVIASNLNDMRFEVDNNTMVML 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00868 303 Gene3D NAC domain 19 160 IPR036093 GO:0003677|GO:0006355
Adu02g00868 303 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Adu02g00868 303 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 299 - -
Adu02g00868 303 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
Adu02g00868 303 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 299 - -
Adu02g00868 303 MobiDBLite consensus disorder prediction 210 232 - -
Adu02g00868 303 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00868 Adu-Chr2 14412104 14418262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00868 6 156 NAC Transcription Factor Family AT1G56010 58.491 9.28e-63 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Adu02g00868 NAM 1.2e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00868 - - aip:107625035 553.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00089 06 1131222 1135088 Adu02g00868 02 14412104 14418262 PCT