Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00855 ATGCCATCTCTCCCGTCCCCGGCGGGGAGAATCCACCGCCTGGAAATGGAGAATTTCAAGTCCTACAAGGGCCACCAAGTAATCGGCCCCTTCTTCGACTTCACCGCCATCATCGGTCCCAACGGCGCCGGAAAATCGAACCTCATGGACGCAATCAGCTTCGTCCTCGGCGTCCGCACCGGCCAACTCCGTGGTGCGCAGCTGAGGGACCTCATCTACGCCTCCGACGACAAGGAGAAGGAGCAGAAGGGACGCAGGGCATTCGTTCGGCTCGTCTACCAGCTCAACAACAATAACGGTAGTAACGGTTCGGACACCGAGATCACGTTCACTCGAGCCATCACCAGCGCCGGCGCCAGCGAGTACCGAATCGACGGTAACGTTGTCACTTGGGATGTTTATAATGCCAAGCTTAAGTCCCTTGGGATACTTGTCAAGGCTCGCAATTTTCTCGTCTTTCAGGGTGATGTAGAATCCATTGCATCAAAAAACCCAAAGGAACTTACTGCCCTTCTCGAGCAGATATCTGGCTCTGATGAGCTCAAGAGGGACTACGAGCAATTTGAAGAAGAAAAGGGTGCAGCTGAAGAAAAATCAGCACTTGTCTATCAGAAGAAAAAGACAGTGGTGATGGAGAGAAAACAGAAGAAAGAACAAAAAGAAGAGGCAGAGAAACATCTCCGACTGCAAGAACAACTGAAATCTATAAAGAAAGAACATTTCCTGTGGCAGTTGTTCAATATAGAAAAGGATGTTGCTAAAACAAACGAGGAGCTTGATGAGGATGAAAAACGGCGTAAAGAAGTTATGGAAGAACTAGAAAATTTTGAACATGAGGCTAGTAAAAAGAAAAAGGAGCAGGCTAAATATCTGAAAGAGATTGCGTTACGTGAAAAGAAAATTACGGAGAAAAGTAGTAGACTTGACAAGAGTCAACCTGAGCTCCTCAAGCTGCGGGAGGAGATTAATCGTATAAATTCAAAAATTAAGAAAAGCAATAAGGAGCTTGAAAAGAAAAGAGCAGAACGGAGGAGACATGCTGATGATATAGAAGAGCTACAGAAGGGCATACAGGATCTTACAGCAAAAATGGCAGCCCTACAAGAAAGGGGTCGAGATGTTCGTGATAAACTACAGTTAGATGGTGATGACTTGGAAGAATATTTTCAAATCAAGGAAAAAGCTGGAATGAAAACTGCAAAGCTAAGAGAGGAGAAAGAGCTTCTAGATAGGCAGCAGCATGCTGATAGTGAAGCTAAAAAAAATTTGGAAGAAAATCTTCAACAGTTGGAAAACAGGGTGTCTGAGTTGGATTTGCAAGAAACACAGATGAAGACAAGGCTTAAAAAAATTCTTGGTGGTTCTGAAGGAAACAAGAATGAGCTTGAGAAACTGAAAAAGGAACTGCGTGTGATGGAGGAGAAACATCGTGATTCTAGGACTAAACATAAAAGCTTGGAGCTAAAAATTAGTGAAATAGAAAATCAGCTACGTGAATTGAAGGCTGATAGATATGAAAATGAGAGAGATGCTAGGCTGTCTCAGGCTGTGGAGGCTCTGAAACGCCTATTTCAAGGGGTCCATGGCCGCATGACTGATCTTTGCAGGCCAACACAGAAGAAGTATAACCTTGCTGTTACTGTTGCTATGGGTAAATTTATGGATGCAGTTGTAGTTGAAGATGAAAAGACTGGAAAGGAATGCATCAAGTATTTGAAAGATCAAAGGCTTCCTCCTCAGACATTCATTCCTCTGCAATCAATTCGAGTGAAGCCAATCATGGAAAGATTGCGCACATTAGGGGGTACAGCGAAACTGGTTTTTGATGTGATTCAATATCCTTTTCAACCATTTGATCCTTCCTTGGAGAAGGCAATTCTCTTTGCTGTGGGAAATACTCTTGTTTGTGATGATCTTGAGGAGGCAAAAGTTTTAGGCTGGAGTGGTGAGAGGTTTAAAGTTGTGACTGTGGACGGAATTCTGCTGACAAAATCCGGCACGATGACTGGTGGCACTAGTGGTGGAATGGAAGCAAGGTCAAAACAGTGGGATGACAAGAAAATTGAAGGACTTAACAAAAAGAAAGAGCAGTATGAATCAGATTTGGAAAAACTAGGATCAATAAGAGATATGCACCTCAAAGAGTCTGAAGCTGCTGGCAAAATTAGTGGACTCGAGAAGAAAATCCACTACGCTGATATTGAGGAGAAAAGCATCAAAGACAAGCTTAGAAATTTGAGCCACGAAAAAAAGAACATCAAAGAAGAAATTGGTCGTATGAGTCCGGAACTCCAGAAGTTAAGAGATGCTGTTGATAAGAGGAAATCAGAAATAAGTATGCTCGAGATGAATATAAATAAAATAACAGATGGGATTTACCAAGAATTTAGCAAGAAAGTTAAGGTTGCAAATATCCGTGAATATGAAGAAAACCGACTCAAAGATGCTCAGAGTGTTGCGGAAGAGAGGCTAGATCTGAGTAGCCAAATTTCAAAATTAAAATATCAATTGGAATATGAGCAAAATAGGGACATGAGTTCAAGAATTCAAGAGCTAGAATCATCCCTGGATACTTTACAGAATAATTTAAAACGGGCACAGAACAAAGAAGCTGAAGTAAAGTTGGCTACCGAGAATGCTACCGAAGAGATTGACCAGCTTAAGAAAGAAATAAAAGAGTGGAAATCAAAGTCGGAAGATTGTGAGAAAGAAATCCAAGAATGGAAAAAGCAGGCTTCGTCAGCCACAACAAACATATCCAAACTTAATCGTCTGATAAACACCAAGGAGGCACATATTGAGCAGATGATTGTACAAAAACAGGAAATATTAGATAAGTGTGAATTTGAACAGATTAGCCTTCCAACCATATCTGACCCGATGGATACCGGCACCTCAACCCCAGGTCCAGTTTTTGATTTTGATCAGCTAAGCAGGGCACTGAAAGATAAGCACTCTGACAGGGATAAAATTGAGGTGGAATTTAAACAAAAAATGGATTCCTTGGTATCTGAAATTGAGAGAACAGCACCAAATTTGAAGGCATTGGACCAATATGAGGCTCTTCTTGAAAAGGAAAAAGCTGTAACTGAAGAGTTTGAATTGGTGAGGAAAGAAGAGAAGGAGAAAGCTGATAGATTCAATTCAGTTAAGCAAAGGAGGTATGAATTGTTCATGGATGCTTTCAACCATATATCGGGCAATATAGATAAAATTTACAAACAACTCACAAAGAGTAGCACACATCCGCTGGGTGGAACAGCATATTTAAACTTGGAAAATGAAGACGATCCTTTCCTACACGGCATCAAGTACACTGCTATGCCCCCAACAAAGCGCTTCCGTGATATGGAGCAGTTATCTGGTGGGGAGAAAACTGTTGCTGCTCTTGCTTTGTTATTTTCCATCCACAGCTACAAGCCTTCACCATTTTTCATATTGGATGAAGTCGATGCTGCATTGGATAACTTGAATGTCGCTAAGGTTGCTGGATTTATCCGTGCAAAGTCTTGTGAAGGAGCAAGGGTTAGCCAGGATGCTGATGGGGGCAACGGTTTCCAGAGTATTGTGATATCACTGAAAGACAGCTTTTATGACAAAGCTGAAGCCTTAGTTGGTGTTTACAGGGACTCTGAAAGAGGTTGTTCGAGGACTCTCACGTTTGATCTGACTAAATACCGTGAGTCATAG 3690 0.4201 MPSLPSPAGRIHRLEMENFKSYKGHQVIGPFFDFTAIIGPNGAGKSNLMDAISFVLGVRTGQLRGAQLRDLIYASDDKEKEQKGRRAFVRLVYQLNNNNGSNGSDTEITFTRAITSAGASEYRIDGNVVTWDVYNAKLKSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKRDYEQFEEEKGAAEEKSALVYQKKKTVVMERKQKKEQKEEAEKHLRLQEQLKSIKKEHFLWQLFNIEKDVAKTNEELDEDEKRRKEVMEELENFEHEASKKKKEQAKYLKEIALREKKITEKSSRLDKSQPELLKLREEINRINSKIKKSNKELEKKRAERRRHADDIEELQKGIQDLTAKMAALQERGRDVRDKLQLDGDDLEEYFQIKEKAGMKTAKLREEKELLDRQQHADSEAKKNLEENLQQLENRVSELDLQETQMKTRLKKILGGSEGNKNELEKLKKELRVMEEKHRDSRTKHKSLELKISEIENQLRELKADRYENERDARLSQAVEALKRLFQGVHGRMTDLCRPTQKKYNLAVTVAMGKFMDAVVVEDEKTGKECIKYLKDQRLPPQTFIPLQSIRVKPIMERLRTLGGTAKLVFDVIQYPFQPFDPSLEKAILFAVGNTLVCDDLEEAKVLGWSGERFKVVTVDGILLTKSGTMTGGTSGGMEARSKQWDDKKIEGLNKKKEQYESDLEKLGSIRDMHLKESEAAGKISGLEKKIHYADIEEKSIKDKLRNLSHEKKNIKEEIGRMSPELQKLRDAVDKRKSEISMLEMNINKITDGIYQEFSKKVKVANIREYEENRLKDAQSVAEERLDLSSQISKLKYQLEYEQNRDMSSRIQELESSLDTLQNNLKRAQNKEAEVKLATENATEEIDQLKKEIKEWKSKSEDCEKEIQEWKKQASSATTNISKLNRLINTKEAHIEQMIVQKQEILDKCEFEQISLPTISDPMDTGTSTPGPVFDFDQLSRALKDKHSDRDKIEVEFKQKMDSLVSEIERTAPNLKALDQYEALLEKEKAVTEEFELVRKEEKEKADRFNSVKQRRYELFMDAFNHISGNIDKIYKQLTKSSTHPLGGTAYLNLENEDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDAALDNLNVAKVAGFIRAKSCEGARVSQDADGGNGFQSIVISLKDSFYDKAEALVGVYRDSERGCSRTLTFDLTKYRES 1229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00855 1229 PIRSF SMC 9 1226 IPR024704 GO:0005524|GO:0016887
Adu02g00855 1229 Coils Coil 413 447 - -
Adu02g00855 1229 Coils Coil 315 377 - -
Adu02g00855 1229 Coils Coil 178 198 - -
Adu02g00855 1229 Coils Coil 455 510 - -
Adu02g00855 1229 Coils Coil 764 784 - -
Adu02g00855 1229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 856 1212 IPR027417 -
Adu02g00855 1229 Coils Coil 245 293 - -
Adu02g00855 1229 SUPERFAMILY Smc hinge domain 489 695 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Adu02g00855 1229 CDD ABC_SMC1_euk 11 165 IPR028468 GO:0005524|GO:0007062|GO:0008278|GO:0016887
Adu02g00855 1229 Pfam SMC proteins Flexible Hinge Domain 525 643 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Adu02g00855 1229 CDD ABC_SMC1_euk 1108 1223 IPR028468 GO:0005524|GO:0007062|GO:0008278|GO:0016887
Adu02g00855 1229 Gene3D - 486 594 - -
Adu02g00855 1229 SMART SMC_hinge_2 525 646 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Adu02g00855 1229 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER 10 1228 - -
Adu02g00855 1229 Coils Coil 736 756 - -
Adu02g00855 1229 Gene3D - 10 205 IPR027417 -
Adu02g00855 1229 Pfam RecF/RecN/SMC N terminal domain 11 1210 IPR003395 -
Adu02g00855 1229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 280 IPR027417 -
Adu02g00855 1229 Coils Coil 688 708 - -
Adu02g00855 1229 Gene3D - 948 1228 IPR027417 -
Adu02g00855 1229 Gene3D - 595 672 - -
Adu02g00855 1229 Coils Coil 842 925 - -
Adu02g00855 1229 Coils Coil 206 239 - -
Adu02g00855 1229 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 10 1228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00855 Adu-Chr2 14070069 14081730 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00855 9 288 Structural Maintenance of Chromosomes family AT5G15920 25.430 1.60e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00855 K06636 - gmx:100785315 1884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g00855 02 14070069 14081730 Adu02g00855 02 14070069 14081730 ECH