Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00850 ATGATGGTTGTTAGCAAGGACGGAAGTGGAAATTTCATCACCATCAACGCAGCCATAGCTGCCGCGCCAAATAACACGGCTTCCAATGATGGCTACTTCCTTGTTTTCATCAAGAAAGGTGTGTATGAAGAGTATGTGTCCATTGCGAAGAACAAGAAGCACTTGATGCTAGTTGGAGATGGAATCAATCAGACAATTATCACCGGCGATCGCAATGTTGTCGATGGCTCTACAATTATCCTTTTCCTACCCTCTCTTTTTTCTCTGCAGAGAGAAGAAGATGAAAAATACTGA 294 0.4286 MMVVSKDGSGNFITINAAIAAAPNNTASNDGYFLVFIKKGVYEEYVSIAKNKKHLMLVGDGINQTIITGDRNVVDGSTIILFLPSLFSLQREEDEKY 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00850 97 SUPERFAMILY Pectin lyase-like 2 78 IPR011050 -
Adu02g00850 97 Gene3D - 1 90 IPR012334 -
Adu02g00850 97 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 2 79 - -
Adu02g00850 97 Pfam Pectinesterase 2 78 IPR000070 GO:0030599|GO:0042545
Adu02g00850 97 PANTHER PECTINESTERASE 2 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00850 Adu-Chr2 13984319 13984612 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00850 1 78 Carbohydrate Esterase AT1G02810 60.256 1.18e-31 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00850 K01051 - gmx:100792847 116.316