Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00846 ATGGATTTTGATCCTTCTTCTTTGTTCCAACAACAAAACACTACTACTCACTACTACTCTTCATCAAATCCCTCTTTTTCTTCTTCTTATTCTTCTTTATTAGATCCTTATAATTACCCTTTAGAAGACTTATTGTGTTTCTTCAATTATGAAGAAGATAACAACAATAATGTTAACAGCAACAACAACAACCTTATTTTTCCCTTCAACGAAATCAAGGAATCTTCATCTTCCTATGATGATTCTTCCAACAATGAAGGATCTCAAGGAAGCAACAATGAATCAACATCATCATCATCACAAGAAGTCTCATCTCAAGGCCAATTATTACCGCCGGTATCGCCGCCGCCGCCGCCGCCGCCATCAACAACAACAACAAAGACTACAACAACAAAATTACCATTATACCCTCCAAGGGAAAACAAGGAGAAAAGGCCCTACAGAGGAGTAAGGAGAAGGCCATGGGGTAAATTTGCAGCTGAGATTAGAGACTCAACAAGGAATGGTGTTAGGGTTTGGATTGGAACATTTGACACAGCTGAAGCTGCAGCTTTGGCTTATGACCAAGCTGCGTTGACCACAAGAGGTTCCATGGCAGTTCTTAATTTCCCTGAAGAAATTGTTAGGGAATCACTCAAGGACATTATGGTAAATACCAACAACAATAATAAGGAAGAAGGCTCTTCTCCTGTTTTAGCACTCAAGAGAAAACATACAATGAGAAAAAAGTCAAAGTCAAAGTCAAAGTCAAAGGTGATGATTAGTAATAGCAACAATAACACCAACAACAATAGCAATAAGAAGGCCAAAAGGGATGATGATGTTTTGGTGTTGGAGGATTTGGGTTCTGAGTATCTTGAACAGCTTCTGAGTTTGACTTCTTCTGAAGGCATTATTTGCTAG 903 0.3876 MDFDPSSLFQQQNTTTHYYSSSNPSFSSSYSSLLDPYNYPLEDLLCFFNYEEDNNNNVNSNNNNLIFPFNEIKESSSSYDDSSNNEGSQGSNNESTSSSSQEVSSQGQLLPPVSPPPPPPPSTTTTKTTTTKLPLYPPRENKEKRPYRGVRRRPWGKFAAEIRDSTRNGVRVWIGTFDTAEAAALAYDQAALTTRGSMAVLNFPEEIVRESLKDIMVNTNNNNKEEGSSPVLALKRKHTMRKKSKSKSKSKVMISNSNNNTNNNSNKKAKRDDDVLVLEDLGSEYLEQLLSLTSSEGIIC 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00846 300 Gene3D AP2/ERF domain 146 206 IPR036955 GO:0003700|GO:0006355
Adu02g00846 300 SUPERFAMILY DNA-binding domain 147 205 IPR016177 GO:0003677
Adu02g00846 300 Pfam AP2 domain 147 196 IPR001471 GO:0003700|GO:0006355
Adu02g00846 300 PANTHER DNA-BINDING DOMAIN 21 293 IPR044808 GO:0003700|GO:0009873
Adu02g00846 300 MobiDBLite consensus disorder prediction 75 150 - -
Adu02g00846 300 ProSiteProfiles AP2/ERF domain profile. 146 204 IPR001471 GO:0003700|GO:0006355
Adu02g00846 300 MobiDBLite consensus disorder prediction 75 109 - -
Adu02g00846 300 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 21 293 - -
Adu02g00846 300 MobiDBLite consensus disorder prediction 110 124 - -
Adu02g00846 300 CDD AP2 147 205 IPR001471 GO:0003700|GO:0006355
Adu02g00846 300 MobiDBLite consensus disorder prediction 237 271 - -
Adu02g00846 300 MobiDBLite consensus disorder prediction 250 265 - -
Adu02g00846 300 PRINTS Ethylene responsive element binding protein signature 147 158 IPR001471 GO:0003700|GO:0006355
Adu02g00846 300 PRINTS Ethylene responsive element binding protein signature 170 186 IPR001471 GO:0003700|GO:0006355
Adu02g00846 300 SMART rav1_2 146 210 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00846 Adu-Chr2 13901845 13902875 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00846 124 297 AP2-EREBP Transcription Factor Family AT3G23240 49.425 6.36e-52 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu02g00846 AP2 1.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00846 K14516 - gmx:100780775 203.756
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g00846 02 13901845 13902875 Adu02g00846 02 13901845 13902875 ECH