Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu02g00843 | ATGGAGGGAGGAAAATCATCATCATCGTCGTCGTCATCAATTTCTAATGGCAATAATGTTGAAGTAAGGTATAGAGGGATTCGTAGGAGGCCATGGGGAAAATTTGCGGCGGAAATTCGTGACCCGACAAGAAAAGGGACAAGAATATGGCTTGGAACATTTGAAACTGCTGAAGAAGCTGCAAGGGCTTATGATGCTGCTGCTTTTCATTTCCGTGGCCATAGGGCCATTCTCAATTTCCCAAATGAGTATCAAGCTCCTCTTAACCCTAATTCGTCCTTGCCTTTGCCTCTTCCTGTTCATCCTCCTCCTCCTGCTCCTCATTCGAACACAAATGCATATAATTTGGGTTCGTATTCGAATGAGGGGATAGTGCAGGGTGATCATAGTCATGATCGTGCTTTCGAATTGGAGTATTTGGACAATAAGTTGTTGGAAGAACTACTCCAACAAGCTCAAGATGATGATAGGTATATATACCAGTGCAATGATCATCATACATTTTACAGATAA | 513 | 0.425 | MEGGKSSSSSSSSISNGNNVEVRYRGIRRRPWGKFAAEIRDPTRKGTRIWLGTFETAEEAARAYDAAAFHFRGHRAILNFPNEYQAPLNPNSSLPLPLPVHPPPPAPHSNTNAYNLGSYSNEGIVQGDHSHDRAFELEYLDNKLLEELLQQAQDDDRYIYQCNDHHTFYR | 170 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu02g00843 | 170 | Pfam | AP2 domain | 23 | 74 | IPR001471 | GO:0003700|GO:0006355 | |
Adu02g00843 | 170 | SMART | rav1_2 | 23 | 87 | IPR001471 | GO:0003700|GO:0006355 | |
Adu02g00843 | 170 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 23 | 148 | - | - | |
Adu02g00843 | 170 | PANTHER | DNA-BINDING DOMAIN | 23 | 148 | IPR044808 | GO:0003700|GO:0009873 | |
Adu02g00843 | 170 | Gene3D | AP2/ERF domain | 22 | 83 | IPR036955 | GO:0003700|GO:0006355 | |
Adu02g00843 | 170 | ProSiteProfiles | AP2/ERF domain profile. | 23 | 81 | IPR001471 | GO:0003700|GO:0006355 | |
Adu02g00843 | 170 | SUPERFAMILY | DNA-binding domain | 23 | 82 | IPR016177 | GO:0003677 | |
Adu02g00843 | 170 | CDD | AP2 | 23 | 82 | IPR001471 | GO:0003700|GO:0006355 | |
Adu02g00843 | 170 | PRINTS | Ethylene responsive element binding protein signature | 24 | 35 | IPR001471 | GO:0003700|GO:0006355 | |
Adu02g00843 | 170 | PRINTS | Ethylene responsive element binding protein signature | 47 | 63 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu02g00843 | Adu-Chr2 | 13840781 | 13841376 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu02g00843 | 18 | 149 | AP2-EREBP Transcription Factor Family | AT3G23230 | 50.758 | 1.58e-39 | 129 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Adu02g00843 | AP2 | 2.3e-14 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu02g00843 | - | - | aip:107628225 | 288.115 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Adu06g01201 | 06 | 16010366 | 16010961 | Adu02g00843 | 02 | 13840781 | 13841376 | PCT |