Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00823 ATGAGCACTACTACGCCTCCTTTCTTTGAGATCCCAGATTGGGACATGTCCCATCATGATCATAACAATGTTTCACACACTTTCTGCTCCCAATCATTCTTCACAACCAACAATAATGGATTATTCACAACCCATGTTGTTAATCACCCTTCTTTCATTAATAACAATTCATCTCTTTCCTTTGATGATGATATCATTGACTTCTCCATTGATTATTCACAATCACAATCACCAACAACCACAGAGAACATCAAGAAGAAGAAGCAGCTTGAAGATGATGAAGAAGAACAAGTTGATGGTGACAAGGGAATTAGAAGAAATTACATAGGAGTTCGGAAAAGGCCATGGGGGAAATTCGCAGCGGAAATTCGAGACACAACAAGGAATGGAAGAAGGGTTTGGCTTGGAACATTCGAAAGTGCAGAAGATGCTGCTTTGGCTTATGATCAAGCTGCATTCTCCATGAGAGGCTACAAGGCTGTTCTCAACTTTCCATTCAAAAGGGTCAAAGATTCTTTGCAAGGAATCATGATGGATTCTGATTCTTGTTCTTGTTCTTCACCTGCACTTGCACTCAAAGAGAGGAATTGCATCCAAAGGAAGTTGTCAAAGACTAAAAAGAAAAGGGAATCATCAGAGAAATCTTCATCATCATCATCATCAACAACTAATGTGATGGTGTTTGAGGATTTGGGGGTTGAATATCTAGAACAACTCCTTAGCATTTCAGATCAAAATTAG 741 0.3914 MSTTTPPFFEIPDWDMSHHDHNNVSHTFCSQSFFTTNNNGLFTTHVVNHPSFINNNSSLSFDDDIIDFSIDYSQSQSPTTTENIKKKKQLEDDEEEQVDGDKGIRRNYIGVRKRPWGKFAAEIRDTTRNGRRVWLGTFESAEDAALAYDQAAFSMRGYKAVLNFPFKRVKDSLQGIMMDSDSCSCSSPALALKERNCIQRKLSKTKKKRESSEKSSSSSSSTTNVMVFEDLGVEYLEQLLSISDQN 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00823 246 ProSiteProfiles AP2/ERF domain profile. 107 165 IPR001471 GO:0003700|GO:0006355
Adu02g00823 246 SUPERFAMILY DNA-binding domain 108 166 IPR016177 GO:0003677
Adu02g00823 246 MobiDBLite consensus disorder prediction 84 101 - -
Adu02g00823 246 MobiDBLite consensus disorder prediction 202 222 - -
Adu02g00823 246 PRINTS Ethylene responsive element binding protein signature 108 119 IPR001471 GO:0003700|GO:0006355
Adu02g00823 246 PRINTS Ethylene responsive element binding protein signature 131 147 IPR001471 GO:0003700|GO:0006355
Adu02g00823 246 SMART rav1_2 107 171 IPR001471 GO:0003700|GO:0006355
Adu02g00823 246 MobiDBLite consensus disorder prediction 75 101 - -
Adu02g00823 246 PANTHER DNA-BINDING DOMAIN 34 244 IPR044808 GO:0003700|GO:0009873
Adu02g00823 246 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B-LIKE 34 244 - -
Adu02g00823 246 Pfam AP2 domain 107 157 IPR001471 GO:0003700|GO:0006355
Adu02g00823 246 Gene3D AP2/ERF domain 106 167 IPR036955 GO:0003700|GO:0006355
Adu02g00823 246 CDD AP2 107 165 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00823 Adu-Chr2 13349455 13350195 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00823 106 244 AP2-EREBP Transcription Factor Family AT3G23240 56.429 6.88e-46 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu02g00823 AP2 7.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00823 K14516 - gmx:100812017 172.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g00823 02 13349455 13350195 Adu06g00267 06 3269520 3270173 ECH
Adu02g00823 02 13349455 13350195 Adu09g01966 09 99309662 99310708 ECH
Adu02g00823 02 13349455 13350195 Adu02g00823 02 13349455 13350195 ECH