Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00821 ATGAGTTCCCCTAATTTCTTTGAGATCCAAGATTGGAAAACATCATCATCACCATATTTTTCCTTCCAAACATTTTCCAACAACAATGTTGATGATTCTCCTTCTTTTGATATGATCGACTTCTCCATGCATTCACAACAAGTCCCAAAAATAGGTAACAACAACAAATACAAGGAGAAAAATGTGAAGAACAAGAAGCATGAAGAAGAAGATGAAGATGTTCATCATCATGGTGAAAAAGGAAGGTACATAGGTGTAAGAAAAAGGCCATGGGGGAAATTCGCAGCCGAAATTCGAGACACAACAAGAAATGGAACAAGGGTTTGGCTTGGAACCTTTGATTTGTGCTGA 351 0.3761 MSSPNFFEIQDWKTSSSPYFSFQTFSNNNVDDSPSFDMIDFSMHSQQVPKIGNNNKYKEKNVKNKKHEEEDEDVHHHGEKGRYIGVRKRPWGKFAAEIRDTTRNGTRVWLGTFDLC 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00821 116 Gene3D AP2/ERF domain 81 115 IPR036955 GO:0003700|GO:0006355
Adu02g00821 116 CDD AP2 82 114 IPR001471 GO:0003700|GO:0006355
Adu02g00821 116 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 15 23 114 - -
Adu02g00821 116 SUPERFAMILY DNA-binding domain 82 114 IPR016177 GO:0003677
Adu02g00821 116 PRINTS Ethylene responsive element binding protein signature 83 94 IPR001471 GO:0003700|GO:0006355
Adu02g00821 116 PRINTS Ethylene responsive element binding protein signature 106 116 IPR001471 GO:0003700|GO:0006355
Adu02g00821 116 Pfam AP2 domain 82 114 IPR001471 GO:0003700|GO:0006355
Adu02g00821 116 MobiDBLite consensus disorder prediction 62 81 - -
Adu02g00821 116 PANTHER DNA-BINDING DOMAIN 23 114 IPR044808 GO:0003700|GO:0009873
Adu02g00821 116 ProSiteProfiles AP2/ERF domain profile. 82 116 IPR001471 GO:0003700|GO:0006355
Adu02g00821 116 SMART rav1_2 82 114 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00821 Adu-Chr2 13331751 13332101 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00821 34 114 AP2-EREBP Transcription Factor Family AT2G31230 51.807 5.61e-17 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu02g00821 AP2 5.8e-07 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00821 K14516 - gmx:100812017 85.1149