Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00819 ATGACTTCCCCTAATTTCTTTGAGATCCAAGACTGGAACACATCATCTTCACCAAATTTTTGCTTCCAAACATTTTCCAACAACAATGTTGATGATTCTCCTTCTTTTGATATCATCGACTTCTCTATGCATTCACAACAAGTCCCAAAAATAGGTAACAACAACAAATACAAGGAGAAAAATGTGAAGAACAAGAAGCATGAAGAAGAAGATGAAGATGTTCATCATCATGGTGAAAAAGGAAGGTACATAGGTGTAAGAAAAAGGCCATGGGGGAAATTCGCAGCCGAAATTCGAGACACAACAAGAAATGGAACAAGGGTTTGGCTTGGAACCTTTGATTGTGCTGAAGATGCTGCTTTGGCTTATGATCAAGCTGCATTTGCCATGAGAGGTTACAATACTGTTCTCAATTTTCCAGTCCAAAAGGTCAAAGATTCCTTGCAAGGAATTGAGTATAGTTGTGGCAACAACAACAACAAAGGGTATTCACCAGCACTTGCACTCAAAGAGAGAAACTACATGAGAAGAAAATTGTCATCATCAAAGGAAAATGATACTACTCAAAATGCAAAGTGTAAAGGGAAAAGTGAAGAATCATCAACATCATCATCATCATCATCATCAAGTAGTAGTGTGATGGTGTTAGAGGACTTAGGAGTTGAATATCTTGAGCAACTCCTAAGTATTTCGGATAATAATAATAATAATCATCAAGGTGGAAGTCCTAGCTATTACTTCAATTAA 747 0.3695 MTSPNFFEIQDWNTSSSPNFCFQTFSNNNVDDSPSFDIIDFSMHSQQVPKIGNNNKYKEKNVKNKKHEEEDEDVHHHGEKGRYIGVRKRPWGKFAAEIRDTTRNGTRVWLGTFDCAEDAALAYDQAAFAMRGYNTVLNFPVQKVKDSLQGIEYSCGNNNNKGYSPALALKERNYMRRKLSSSKENDTTQNAKCKGKSEESSTSSSSSSSSSSVMVLEDLGVEYLEQLLSISDNNNNNHQGGSPSYYFN 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00819 248 MobiDBLite consensus disorder prediction 59 79 - -
Adu02g00819 248 MobiDBLite consensus disorder prediction 178 193 - -
Adu02g00819 248 SMART rav1_2 82 146 IPR001471 GO:0003700|GO:0006355
Adu02g00819 248 PANTHER AP2 DOMAIN CONTAINING PROTEIN, EXPRESSED 56 230 - -
Adu02g00819 248 MobiDBLite consensus disorder prediction 178 211 - -
Adu02g00819 248 PANTHER DNA-BINDING DOMAIN 56 230 IPR044808 GO:0003700|GO:0009873
Adu02g00819 248 Gene3D AP2/ERF domain 81 142 IPR036955 GO:0003700|GO:0006355
Adu02g00819 248 Pfam AP2 domain 82 132 IPR001471 GO:0003700|GO:0006355
Adu02g00819 248 ProSiteProfiles AP2/ERF domain profile. 82 140 IPR001471 GO:0003700|GO:0006355
Adu02g00819 248 CDD AP2 82 142 IPR001471 GO:0003700|GO:0006355
Adu02g00819 248 MobiDBLite consensus disorder prediction 194 211 - -
Adu02g00819 248 SUPERFAMILY DNA-binding domain 82 141 IPR016177 GO:0003677
Adu02g00819 248 PRINTS Ethylene responsive element binding protein signature 83 94 IPR001471 GO:0003700|GO:0006355
Adu02g00819 248 PRINTS Ethylene responsive element binding protein signature 106 122 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00819 Adu-Chr2 13303430 13304176 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00819 83 236 AP2-EREBP Transcription Factor Family AT3G23240 48.701 6.69e-45 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu02g00819 AP2 3.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00819 K14516 - gmx:100812017 193.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g00819 02 13303430 13304176 Adu02g00819 02 13303430 13304176 ECH
Adu06g00267 06 3269520 3270173 Adu02g00819 02 13303430 13304176 PCT