Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00818 ATGATGGATGAACAGAATGAATTCGAACAAGATTTCAGAGATGAATTTACCGAGGGAGCATTTTTTTCTGAATCTGATATGTCATATTATATCCTTGAAGCCGCTTATGCGGTTGACTCCATGCAAGACATTACATCTTTGAAATTTAGTGAGAATGTTGCGGAGGAAATTGGCAAATATCACTTTTCTACTTTGCATCTTGCATTTGATTTTTATATGAAGTACTCAAAGTCGAAAGGCTTTAGTGCAAGGAAGAGCAAGACCTTCAAGAATAGTAGTGGCGAGATTTACAGACAAATGTTTGTATGCCATAGGCAAGGATTCAGGATGGAGAAATATTACACGATGGAAAAAAGGAAGAAGGAGCCTAGATTGGAAACAAGAACTGGATGTAAAGCCCGAATGGATGTTAAATTTGTACCAAAAAGTGGAAGGTGGCATATCTTTTATTTCTCTGACGAACACAACCATGATCTATTGGATACACAATTCAGTGCTATGTTGCCTGCCCACAGAAAAATGTCAGAGGCAGATATTATGCAAATGATGAACATGCTAAAAGATATGTACAATGAGATTGCTCGGCAAAGGCGTCAAATTCTTGGTGATGCAGCACGAGTGTTGAAGAAGTTGGAGGATATGCAGTTGAAGGATCCACAATTATATTTCAAGGCATGTCACGATTCAAGAGCACACATGCGCTTTAACGAATTTAATGCTGATTATGAATCTACACGTGGGGTACCCGTCATGCAAACTTGTATAGAGCTGCTAGAGAGATATGCTGCTGAGTTATACACTCATGAGATATTTCTTTTCTTTCGGCCATTTCTCTCCAGAGCTGGATCAATGCGGGTTCTAAAGATAGATAATACCAATGATTGCATAAAGTACATTGTGTGTAAGCATGGGAGGCCCGATTTTACGTGGACCGTTGATTTTCATCAAGAAGAAATGATCTTCATGTGTACCTGTTTACGAATGGAGTCATTTGCTATTCCATGCGAACATATTGTGAAAGTAATGGTTGACAGAGACATCCGTGAGATTCCCCGGTCATTGGTATTGGATAGATGGACAAAAAAGGTTAAATCAGCACTCAATGATCCAAGTGGGTTCACCAGGGATGCTGTTGTTATTAGTCGTCAAAGTGCTTTGGTGGAATTTTCTAAACAACTGGCTGCTGTTGCTGCTAAAGTACCAGAGAGATATGAAGAGACACGTGATTTAATTATGGGATTGTACTCATCTTACAAGGCTGCAGACGAAGGAGAAAATCAACCTCACTCAGGTGTAGCTAGAAGTAGCAATCTGTATGTGCATCCAACCACTGGAGGCTCAGGACAACCATCTAAGAAGAAGAAGCGGCAACGTTGTAGTGTTTGTCAAATGGAAGGACATAAGAAGACAACATGTCCTTGGCAAAAGGACACTGACAACAACGTTATAGAAAATGAAGCTATCGGTTCGGACGATGGCGACATGTGTACCGAAGCGACGGCTGAGTTAGATAGTAATAGTTAG 1524 0.4029 MMDEQNEFEQDFRDEFTEGAFFSESDMSYYILEAAYAVDSMQDITSLKFSENVAEEIGKYHFSTLHLAFDFYMKYSKSKGFSARKSKTFKNSSGEIYRQMFVCHRQGFRMEKYYTMEKRKKEPRLETRTGCKARMDVKFVPKSGRWHIFYFSDEHNHDLLDTQFSAMLPAHRKMSEADIMQMMNMLKDMYNEIARQRRQILGDAARVLKKLEDMQLKDPQLYFKACHDSRAHMRFNEFNADYESTRGVPVMQTCIELLERYAAELYTHEIFLFFRPFLSRAGSMRVLKIDNTNDCIKYIVCKHGRPDFTWTVDFHQEEMIFMCTCLRMESFAIPCEHIVKVMVDRDIREIPRSLVLDRWTKKVKSALNDPSGFTRDAVVISRQSALVEFSKQLAAVAAKVPERYEETRDLIMGLYSSYKAADEGENQPHSGVARSSNLYVHPTTGGSGQPSKKKKRQRCSVCQMEGHKKTTCPWQKDTDNNVIENEAIGSDDGDMCTEATAELDSNS 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00818 507 ProSiteProfiles Zinc finger SWIM-type profile. 308 346 IPR007527 GO:0008270
Adu02g00818 507 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 49 178 IPR031052 GO:0006355
Adu02g00818 507 MobiDBLite consensus disorder prediction 486 507 - -
Adu02g00818 507 MobiDBLite consensus disorder prediction 429 450 - -
Adu02g00818 507 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 234 410 IPR031052 GO:0006355
Adu02g00818 507 PANTHER OS03G0181600 PROTEIN 49 178 - -
Adu02g00818 507 Coils Coil 179 199 - -
Adu02g00818 507 PANTHER OS03G0181600 PROTEIN 234 410 - -
Adu02g00818 507 MobiDBLite consensus disorder prediction 422 457 - -
Adu02g00818 507 Pfam FAR1 DNA-binding domain 70 160 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00818 Adu-Chr2 13251397 13253661 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu02g00818 FAR1 1.2e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00818 - - adu:107458210 545.814