Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00817 ATGAATACTCCTTTCTTTGAGATCCAAGATTGGAACATGTCCCATGATGTTTTTCCAGACAATTTTTGTTTTGAACCATTCACAAGCAATGATTTTGTTGATGACCCTTTTCATCATTCTCTTTCCTTTGATAGGATTGATGAATCCTACATGGATTCATCAACAACAACAACCATGGAGAACAACAACAACATCATCAAGAACAAGAACAAGAAGAAAGAGAATATTGAAGTTGGTAAGGGAAATGGAGGTTACATAGGAGTTCGGAAAAGGCCATGGGGAAAATTTGCAGCAGAAATTCGAGACACAACGAGGAATGGAAGAAGGGTTTGGCTTGGAACATTCGAAAGTGCTGAAGAAGCTGCTTTGGCTTATGATCAAGCTGCATTTTCCATGAGAGGCTACAACGCTGTTCTCAACTTTCCATTCAAAAGGGTCAAAGATTCTTTGCAAGGAATCATGATGGATTCTGATTCTTGTTCTTGTTCTTCACCTGCACTTGCACTCAAAGAGAGGAATTGCATCCAAAGGAAGTTGTCAAAGACTAACAAGAAAAGGGAATCATCAAAGAAATCATCATCATCATCATCAACAACTAATAATAGTAATGTGATGGTGTTTGAGGATTTGGGGGTTGAATATCTAGAACAACTCCTTAGCATTTCAGATCAAAATTAG 678 0.3791 MNTPFFEIQDWNMSHDVFPDNFCFEPFTSNDFVDDPFHHSLSFDRIDESYMDSSTTTTMENNNNIIKNKNKKKENIEVGKGNGGYIGVRKRPWGKFAAEIRDTTRNGRRVWLGTFESAEEAALAYDQAAFSMRGYNAVLNFPFKRVKDSLQGIMMDSDSCSCSSPALALKERNCIQRKLSKTNKKRESSKKSSSSSSTTNNSNVMVFEDLGVEYLEQLLSISDQN 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00817 225 Pfam AP2 domain 84 134 IPR001471 GO:0003700|GO:0006355
Adu02g00817 225 PANTHER DNA-BINDING DOMAIN 20 221 IPR044808 GO:0003700|GO:0009873
Adu02g00817 225 Gene3D AP2/ERF domain 84 144 IPR036955 GO:0003700|GO:0006355
Adu02g00817 225 SUPERFAMILY DNA-binding domain 84 143 IPR016177 GO:0003677
Adu02g00817 225 CDD AP2 85 142 IPR001471 GO:0003700|GO:0006355
Adu02g00817 225 PRINTS Ethylene responsive element binding protein signature 85 96 IPR001471 GO:0003700|GO:0006355
Adu02g00817 225 PRINTS Ethylene responsive element binding protein signature 108 124 IPR001471 GO:0003700|GO:0006355
Adu02g00817 225 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 20 221 - -
Adu02g00817 225 ProSiteProfiles AP2/ERF domain profile. 84 142 IPR001471 GO:0003700|GO:0006355
Adu02g00817 225 SMART rav1_2 84 148 IPR001471 GO:0003700|GO:0006355
Adu02g00817 225 MobiDBLite consensus disorder prediction 178 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00817 Adu-Chr2 13190887 13191564 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00817 26 223 AP2-EREBP Transcription Factor Family AT3G23240 47.739 2.19e-48 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu02g00817 AP2 6.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00817 K14516 - gmx:100812017 202.216