Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00810 ATGACCAATAATAATAATCCTTTCTTGTTCCATAACACAGATTTTTGGGATGTTGATTCGGACACTGCCTCCTTTGGGTTCCAATCATTGAAAACCAAGAATGATTTTGATGAGCCATTTGAGGATTCTTTATCATTTGACATGATTGACTTCTCATTATCATCATCATCTGAATCAAGAACCCTAAAGAAGGAGAAGAAACATGAAGAAGAAGAGGAAGATGGTAAAAGAAGAGGAAGAAGAAGTTACATAGGAGTGAGGAAGAGGCCATGGGGAAAATTTGCAGCAGAAATTCGAGACACAACAAGGAATGGAAGAAGGGTTTGGCTTGGAACATTCGAGAGTGCTGAAGATGCTGCTTTGGCTTATGATCAAGCTGCATTCTCCATGAGAGGCTACTCTGCTCTTCTCAACTTTTCTTTCCAGAAGGTCAAAGATTCTTTGCAAGGAATCATCATGGATTCTGATTCCAACAACAAACACAAACCCTTTTCTTCTTCTTCACCTGCACTTGCACTCAAAGAGAGGAACTCCCTCCAAAGAAAATTGGCATCATGGTCCTCAAAGGCTAATAACAAGAACATCAAGAACAAAAACAAGGATTCATCATCATCATCATCATCATCATCTAAGGAATCTTCATCAACTACTACTACTATTACTAATAATAATAATGGTGGTGTCATGGTTTTAGAGGATTTGGGAGTTGATTATCTTGAGCATCTATTAACCATTTCAGAATCTCATCATCAAAACACAAGCCCTAACTACTACTGcaacaacaatgaagtcttgttccactcgtcaggtgcgatcgtgtacaatgatccaacaaTAGTGTAA 843 0.3535 MTNNNNPFLFHNTDFWDVDSDTASFGFQSLKTKNDFDEPFEDSLSFDMIDFSLSSSSESRTLKKEKKHEEEEEDGKRRGRRSYIGVRKRPWGKFAAEIRDTTRNGRRVWLGTFESAEDAALAYDQAAFSMRGYSALLNFSFQKVKDSLQGIIMDSDSNNKHKPFSSSSPALALKERNSLQRKLASWSSKANNKNIKNKNKDSSSSSSSSSKESSSTTTTITNNNNGGVMVLEDLGVDYLEHLLTISESHHQNTSPNYYCNNNEVLFHSSGAIVYNDPTIV 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00810 280 MobiDBLite consensus disorder prediction 60 81 - -
Adu02g00810 280 Gene3D AP2/ERF domain 81 142 IPR036955 GO:0003700|GO:0006355
Adu02g00810 280 ProSiteProfiles AP2/ERF domain profile. 82 140 IPR001471 GO:0003700|GO:0006355
Adu02g00810 280 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 36 246 - -
Adu02g00810 280 MobiDBLite consensus disorder prediction 183 226 - -
Adu02g00810 280 CDD AP2 83 139 IPR001471 GO:0003700|GO:0006355
Adu02g00810 280 SUPERFAMILY DNA-binding domain 83 141 IPR016177 GO:0003677
Adu02g00810 280 SMART rav1_2 82 146 IPR001471 GO:0003700|GO:0006355
Adu02g00810 280 PANTHER DNA-BINDING DOMAIN 36 246 IPR044808 GO:0003700|GO:0009873
Adu02g00810 280 PRINTS Ethylene responsive element binding protein signature 83 94 IPR001471 GO:0003700|GO:0006355
Adu02g00810 280 PRINTS Ethylene responsive element binding protein signature 106 122 IPR001471 GO:0003700|GO:0006355
Adu02g00810 280 MobiDBLite consensus disorder prediction 60 80 - -
Adu02g00810 280 Pfam AP2 domain 83 132 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00810 Adu-Chr2 12982663 12983505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00810 77 247 AP2-EREBP Transcription Factor Family AT3G23240 49.123 4.84e-43 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Adu02g00810 AP2 9.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00810 K14516 - gmx:100782036 156.377