Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00784 ATGACAGGTTCTGGTTCTCCTTGTGGTGCTTGCAAGTTCTTGAGGAGAAAATGTGTGAGAGGTTGTGTTTTTGCACCTTACTTCTGCCATGAACAAGGTGCTACCCATTTTGCAGCCATTCACAAAGTGTTTGGTGCAAGCAATGTCTCAAAGCTCCTTGCCCATCTTCCGGTCGGCGACCGCTGCGAAGCGGCCGTCACAATTTCGTATGAAGCTCAGGCAAGGCTTCAAGATCCTATCTATGGCTGTGTCTCTCATATATTTGCCCTTCAGCAACAGGTGGTGAATTTACAAGCACAGCTAGCATATCTAAAGGAACAAGCAGCACAACAAAGTTGTGTGAATGGTGGAAACCCTAATAATGAGAGATACTTTGATAAACCTAATATTGCTGATAACAACAACAATAATTTCATTACTCCTCAAGATCTTCAAAGTTGGTTGTTCAATATGGAAAATTCTTCATCTTCAAACTTGGGTGGCCTTGAATCTCTTCATCCAAATTTGTGCAACAACAATGATTCTTCTTATAATGGTATTAGTGATGGAAACAACAACAACAACAATGTTAATAATTCCATGATGATGATGATGGATCTAAAGCCAATTAATAATAATGGGAGTTACTATGAAAATTCAAACTCATTCTCTAGCTTTGAAGAGAGTTCTTCAAACTCCATGTCCTATGAGATGGAAACAAATGGTGGGACAAAATGGTCTTTTCATGAAGTTGATGATCTTCATTCAGTGGCCTTTGGTTACAGAAGATAA 771 0.393 MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVGDRCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLAYLKEQAAQQSCVNGGNPNNERYFDKPNIADNNNNNFITPQDLQSWLFNMENSSSSNLGGLESLHPNLCNNNDSSYNGISDGNNNNNNVNNSMMMMMDLKPINNNGSYYENSNSFSSFEESSSNSMSYEMETNGGTKWSFHEVDDLHSVAFGYRR 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00784 256 ProSitePatterns EF-hand calcium-binding domain. 132 144 IPR018247 -
Adu02g00784 256 PANTHER LOB DOMAIN-CONTAINING PROTEIN 17-RELATED 1 255 - -
Adu02g00784 256 Coils Coil 87 107 - -
Adu02g00784 256 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 255 - -
Adu02g00784 256 Pfam Lateral organ boundaries (LOB) domain 7 105 IPR004883 -
Adu02g00784 256 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00784 Adu-Chr2 12486094 12487719 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00784 7 122 AS2 family AT3G58190 81.897 7.70e-69 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Adu02g00784 LOB 6.9e-36 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g00784 02 12486094 12487719 Adu02g00784 02 12486094 12487719 ECH
Adu06g01194 06 15934381 15935266 Adu02g00784 02 12486094 12487719 PCT