Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00781 ATGGCTTCTAGTAGCTCCGGGTCGCCGTGCGGGGCATGCAAGTTCCTAAGGCGAAAGTGCGCGTCGGATTGCGTATTCGCGCCATACTTCAGCTGGGAAGAAGGGGCGGCAAGATTTGCAGCGATCCACAAAGTGTTTGGTGCAAGCAATGTTTCAAAGATGCTAATGCAGATTCCAAGTCATGAAAGGTGTGAGGCTGTGCTCACAATTGCTTATGAGGCTCAAGCTCGTATTAGAGACCCTGTCTATGGTTGTGTCTCTCATATTTTTGCCTTACAACAACAGGTAGCATGCTTGCAAGCACAACTAATGCAAGTGAAGGCAGAGCTAGCTCATCAAAACATGCAGAATAATCATCATCAGTGGAACAATAATAATATTGGAGTAGGACAAACATTATTATTCAATAATTATAGTAATAATAATCAATTTTGTCCCACTAATAATGATATTAATTACATGCCATCACCCCAAAGTTGTTCACTTGATGAGTCAATTGATCAAAGTAGCATTATTAGTGATGGAATAATGAGCATGCTGAGCACTGTGGAGGATTTCTCATTCCAAGCTTGTTCCAAGAGAAGATCATCATCTTATAATGACACTGATTTGGGTGAGCTGCAAGAATTGGCACTTAGGATGATGAGGAATTATAACTAG 660 0.4136 MASSSSGSPCGACKFLRRKCASDCVFAPYFSWEEGAARFAAIHKVFGASNVSKMLMQIPSHERCEAVLTIAYEAQARIRDPVYGCVSHIFALQQQVACLQAQLMQVKAELAHQNMQNNHHQWNNNNIGVGQTLLFNNYSNNNQFCPTNNDINYMPSPQSCSLDESIDQSSIISDGIMSMLSTVEDFSFQACSKRRSSSYNDTDLGELQELALRMMRNYN 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00781 219 Pfam Lateral organ boundaries (LOB) domain 9 107 IPR004883 -
Adu02g00781 219 ProSiteProfiles LOB domain profile. 8 110 IPR004883 -
Adu02g00781 219 PANTHER LOB DOMAIN-CONTAINING PROTEIN 16 1 216 - -
Adu02g00781 219 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 216 - -
Adu02g00781 219 Coils Coil 89 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00781 Adu-Chr2 12423865 12425796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00781 3 217 AS2 family AT2G42430 51.626 2.21e-73 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Adu02g00781 LOB 4.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00781 K13944 - cpap:110815110 250.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01193 06 15908049 15909278 Adu02g00781 02 12423865 12425796 PCT