Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00778 ATGGAATTCTACAATAACCTAGAAGATTATTCGAAGAGTTCGTCGAGCGAAGAAACCGACCGGTCGTTGTACGAGCAAGCCGGAGATCATCAAGAGATGGGAACAGGAAGATCCTATGAGTGTGTGTTTTGCAAGAGGGGATTCACCACAGCACAAGCTTTGGGTGGACACATGAACATTCATAGAAAAGATAGAGCCAATAACAAAGCCAAAATTCCAGCTTCTAGTTCAAGCAAGGTTGATGATGAGAACTACTATGCAGATCTAGGGCACTATTCATCACCAATTCCAAGCTATCTTGCAAGAAATGGAAATTATCATGAGGAAGCAAGATTTGGATAG 342 0.4211 MEFYNNLEDYSKSSSSEETDRSLYEQAGDHQEMGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRANNKAKIPASSSSKVDDENYYADLGHYSSPIPSYLARNGNYHEEARFG 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00778 113 Gene3D Classic Zinc Finger 11 91 - -
Adu02g00778 113 PANTHER OS07G0101800 PROTEIN 5 103 - -
Adu02g00778 113 PANTHER TRANSCRIPTIONAL REGULATOR TAC1-LIKE 5 103 - -
Adu02g00778 113 MobiDBLite consensus disorder prediction 13 27 - -
Adu02g00778 113 Pfam C2H2-type zinc finger 39 63 - -
Adu02g00778 113 ProSiteProfiles Zinc finger C2H2 type domain profile. 39 66 IPR013087 -
Adu02g00778 113 ProSitePatterns Zinc finger C2H2 type domain signature. 41 61 IPR013087 -
Adu02g00778 113 MobiDBLite consensus disorder prediction 1 34 - -
Adu02g00778 113 SUPERFAMILY beta-beta-alpha zinc fingers 37 65 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00778 Adu-Chr2 12279933 12280701 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00778 39 113 C2H2 Transcription Factor Family AT5G43540 46.914 3.38e-16 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu02g00778 zf-C2H2_6 7.3e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00778 - - aip:107628237 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g00778 02 12279933 12280701 Adu02g00778 02 12279933 12280701 ECH