Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00776 ATGCGGTGCAGGACATGCTGTAAGAGCCGTGGCTTTGATTGCCAAACCCATGTGAAGAGCACTTGGGTTCCCGCTTCCAAGCGCCGCGAGAGGCAGCAACAACTCACCTCTATCCAACAACAGCTTCTTGCTGCTGATGTTCCCAAGCGCCAAAGAGATCATGCCtgGGAGCGCACGCGCGGGGGTGGAGGACGACGCTGCTATCACCGCCGTTTATCCTCACCACGTCGCTGTCGTGCTTGCGCCCACGAAGAGAAACTGACAAAAGAGGGTGGCGGGCACGGGGGTGGGAGAAACTGCCCCTGCGTCGCCGTCATTGACCGGCCAGGCCACCTCGCCATTgtcgccgccgtgggttttgctgctggtgaggagaaggcgccgctacgtttggttgttgctgtcgcatcccctatctctgccgacgctgggaacgcacagggggtagacgcagggaagaaggtggaggaaggagcaggaggcgccgttcgcattgctacgcccagccgccgtcggtggagccaccgtcgttgccgcggttatgggtgctgttaccgggatccgttgtcgtggtcggaattcgttaccgctgtcgtgtga 600 0.3417 MRCRTCCKSRGFDCQTHVKSTWVPASKRRERQQQLTSIQQQLLAADVPKRQRDHAWERTRGGGGRRCYHRRLSSPRRCRACAHEEKLTKEGGGHGGGRNCPCVAVIDRPGHLAIVAAVGFAAGEEKAPLRLVVAVASPISADAGNAQGVDAGKKVEEGAGGAVRIATPSRRRWSHRRCRGYGCCYRDPLSWSEFVTAVV 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00776 199 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 1 28 IPR006510 -
Adu02g00776 199 PANTHER PROTEIN SHI RELATED SEQUENCE 7 1 59 - -
Adu02g00776 199 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 59 IPR007818 GO:0003700|GO:0006355
Adu02g00776 199 Pfam Domain of unknown function (DUF702) 1 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00776 Adu-Chr2 12157174 12159228 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00776 1 53 C2H2 Transcription Factor Family AT5G66350 77.778 2.57e-21 87.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Adu02g00776 DUF702 9.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00776 - - adu:107462205 107.457