Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00775 ATGGAAGGGAAGAACTATTATATGAAGAACAAGAACACTAGTAGTAGTACTACTCATATTAACAATAGCTTTGAGGAGCATTATTCATGGGAAACTTCTTCATCAACACGGCCAACAAGAAGCTATGCTTGTAGCTTTTGCAAGAGAGAGTTCAAATCTGCTCAAGCTTTGGGTGGACACATGAATGTTCATAGAAGGGACAGGGCAAGATTGAGATCTTCATGGATTTCTAATCACACTCCTAAACCTAATCTTAACCCCAACCCTAACCCTAATCCTACAACGACTCTTGTTTCTTCATCATCATCTCCTTTATCTAATGATCCTATCAATAATTGTTCACATATTTCTCCAATTTATAGCCCTAATTGTTGTCTCAATTTATCTTCTTCTTCTTCTTCACCCTCCCCTAATTTAGCTTCCATCACAAGAAGTGAAGATAAAAAACCTAGACTCATCATATCTACTCCACAAGTTCTTCCTCTTGTGATGAATAGTCCTCAAAACATGGTGATGATGATGAGTAAGAAAAGCAAAAGTGGTGATTTTGTTGGTGGGGTTGATGATGATGAGAATTACAAGGATAATGTTTTCAAGCACAAGAATGAGCATAACAACATTACCTTGGAGTTGGGAATAGGATTGGTTAAGCACAAAGAGCAGAAGTTGGATTTGGAGCTTAGACTCTAG 690 0.3754 MEGKNYYMKNKNTSSSTTHINNSFEEHYSWETSSSTRPTRSYACSFCKREFKSAQALGGHMNVHRRDRARLRSSWISNHTPKPNLNPNPNPNPTTTLVSSSSSPLSNDPINNCSHISPIYSPNCCLNLSSSSSSPSPNLASITRSEDKKPRLIISTPQVLPLVMNSPQNMVMMMSKKSKSGDFVGGVDDDENYKDNVFKHKNEHNNITLELGIGLVKHKEQKLDLELRL 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00775 229 MobiDBLite consensus disorder prediction 91 105 - -
Adu02g00775 229 ProSiteProfiles Zinc finger C2H2 type domain profile. 42 69 IPR013087 -
Adu02g00775 229 Pfam C2H2-type zinc finger 42 66 - -
Adu02g00775 229 ProSitePatterns Zinc finger C2H2 type domain signature. 44 64 IPR013087 -
Adu02g00775 229 PANTHER TRANSCRIPTIONAL REGULATOR SUPERMAN 8 229 - -
Adu02g00775 229 Gene3D Classic Zinc Finger 12 84 - -
Adu02g00775 229 PANTHER OS07G0101800 PROTEIN 8 229 - -
Adu02g00775 229 MobiDBLite consensus disorder prediction 76 105 - -
Adu02g00775 229 SUPERFAMILY beta-beta-alpha zinc fingers 39 68 IPR036236 -
Adu02g00775 229 SMART c2h2final6 42 64 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00775 Adu-Chr2 12123725 12124414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00775 5 229 C2H2 Transcription Factor Family AT3G23130 32.174 2.25e-21 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu02g00775 zf-C2H2_6 6.6e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00775 - - ahf:112721869 369.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g00775 02 12123725 12124414 Adu02g00775 02 12123725 12124414 ECH
Adu06g01189 06 15853445 15854068 Adu02g00775 02 12123725 12124414 PCT