Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00772 ATGGGGGTTGCAGAAAACATTGTTGTGGGTTCTCATGTTTGGGTTCCAGATCCGGAATTAGTTTGGATTGATGGACAAGTACTAAGTATCAAGGGAAAGGAAGCTGAGATTCAACTTAGCGATGGGAATAAGGTTGGTTCTAGTTTGTCAAAGTTACACCCCAAGGATGAAGATGCTCCAGCTAATGGTGTTGATGACATGACCAAGCTTGCATATTTGCATGAGCCGGGAGTGTTGTATAATCTGAAAAATAGATATGACATCAATGAAATATATACTTATACCGGAAATATTCTTATTGCCATCAATCCCTTCAAAAATATTGAAGACCTGTATGATGTCAACGTCATGAAACGTTACAAGGGAGCAGCAGTTGGAGATTTAAGCCCACATGTTTTTGCTATTGCTGAAGCAGCATATAGAGCAATGATTAATGAGGAGAAGAACAACTCTATTCTGGTTAGTGGTGAGAGTGGTGCTGGTAAGACAGAAACGACCAAAATGATTATGCAGTACCTGGCATTTTTGGGTGGTCATAATGCTTCTGAAGGGCGAACTGTTGAAAAACAAGTTCTAGAATCAAACCCAGTTCTTGAAGCATTTGGTAATGCAAAGACAGTAAAAAATTCCAATTCTAGCCGTTTTGGAAAATTTGTTGAGATTCAATTTGATAAGCATGGACGAATATCCGGTGCAGCCATTAGAACTTATCTACTAGAGAGATCACGTGTATGCCAAATCTCGGATCCTGAGCGTAATTATCACTGTTTTTACCTGCTTTGTGCTTCACCTCCTGAGGACAAAGAGAAATATAAGTTGGGAGACCCTAAATCATTTCACTACCTTAATCAATCCAATTGCTATGAATTAGTTGGTATTAATGCAGCTCAAGAGTATCTTAGCACCAAGAGAGCCATGGAAGTTGTGGGAATAAATCAAGAAGAGCAGGAAGCAATCTTCAGAGTTATAGCTGCTATTCTTCATCTTGGAAACATTAACTTCGCAAAATCAGAGGAAGAAACTGATTCATCGGTTCTAGAAAATGAAGAGTCCAAGTTGCATCTCCAAATAACAGCAGAACTTCTCATGTGTGACCAAATTTCTGTTGTTATCATTTGCAATAGCTTTCTTTTTGTTAATATTACATATCTATTAAATTATTTCTTATTCAGGTGTGATCCTAGTGCTTTGGAAGATGCACTTTGTAAGCGTGTGATGATTACCCCAGAGGAAGTTATTAAAAGAAGTCTTGATCCTCTTGGTGCAACGGTTAGCAGGGATGGTTTAGCCAAAACACTATATTCTCGTTTATTTGACTGGTTAGTCCAAAAAATCAATGTCTCAATTGGGCAAGACCCAGAGTCAAAATGTCTCATTGGTGTTCTTGACATATATGGCTTTGAAAGCTTTAAGAATAACAGTTTTGAGCAGTTTTGTATTAATTTCACAAATGAAAAGCTGCAGCAACATTTCAACCAGCATGTGTTTAAGATGGAACAAGAGAGATATACAAAAGAAGGAATTGACTGGAGCTACTTAGAATTTGTGGATAATCAAGATGTACTTGATCTAATTGAAAAGAAACCAGGTGGAATCATTGCTCTTCTTGATGAAGCTTGTATGTTTCCCAAGTCGACCCATGAGACATTTGCAACAAAGCTTTATCAGACATTCAAAGATCACAAACGCTTTATAAAGCCAAAACTGGCACGGTCAGACTTCACTGTTGTACATTATGCAGGCGAGGTCCAATATCAGTCTGAGCAGTTTCTTGACAAAAACAAGGACTACGTTGTTCCTGAACATCAAGACATGCTAAGTACTTCGAGATGTTCATTTGTAACACGACTTTTTCCTCCACTTACTGAGGAGACATCAAAATCTGCTAAGTTTTCTTCTATTGGTTCTCGTTTTAAGCTACAATTACAACAATTGATGGACACACTCAATCTCACAGAGCCTCACTATATTAGATGTGTGAAGCCAAACACTGTTTTACAACCTGCCATATTTGATAATATGAACGTCATCCAACAATTGCGCTCTGGCGGTGTTCTTGAAGCAGTAAGAATTAAGATTGCTGGATTCCCAACCCACAGGACTTTTCAGGAATTTCTAACTCGATTAGGCATTCTTGCTCCAGAGGTTCTTCGTGGAAACATCGATGAAAAGGAAGCATGTAAAACGATATTGGAGAAGGCTGGTCTGACAGGATATCAGATAGGGCAAACACAAATATTCTTGAGAGCTGGTCAGATGGCTGAGTTAGATGCTCTGAGAGCACGTTTACTTTACGGTTCTGCAACAGTTATCCAGAAGCACACTAGACGTTATCCTAGACGGAAAGAATATGTTGCATTGTTCAAGTCCTCTATCTTTATGCAATCTATTTGTAGAGGTGAACTGGCTCGGAGAAAATTTTATCACCTGAGGAGGAGCAAGGCTGCAGTCAGAATTCAAAAGCACACACGTGGAAAACTTTCCAGAAAAAAATACAGCAAGATAAAGGTTGCAGCTATATATTTGCAGGCAGCCTTTCGAGCAATGGATGCTAAGGATAAATTAAATAAATTAAGAAATACGAAGAAAAATTCTGCATCAATCACTATTCAGTCATATTATCGCCGGCATAGAGCTCTCTTGGAATATAAAACCCTTAAGAAATCAGCAATCATTTCACAAAGTGTCAATGATTCCGTGGAGAAAGACGAAGACAAGGTTTTGGATAACAAAACTATTTCAGTTGAAGCAGTTTCAAATGTTGTCCAAGAAGAACCCTCAAGTACTTTCCAAGAGGAACCCTCAAATGCTAGCCAAGAAGAACCCTCATGTACTATCGAAGAAGAAATGTTAAATGCTGTCCAAGAAGAACTCACAATTACTTCCGAACATGTTGAAAGAACTGAAGCTATTAGGGAATCCCATAGTCCTTGTCCTTTACAAGGAAGTGAAACGGTTGAAGTTCTTACTGAAGAAATAAAAAAGTTAAAGGTCATGTTGCAGGCAGAAAAAGTAAGAGCAGACGAATGCGAAAGGAAATATGTAGAAGCTCAAGGATCAAGTGAAGAGTTACGGAAAAAGATGATATCTTCCATGTCAAGTCAAGTTGCCGATTTGAAGATGATTTTAAGTACTTCATCAAGATTGAGTTCAACTTTTCGACCTATTGCTAGAGTTGATGTTGCTTCCAGTAACTCCGATACTTCATCTACAGACTCTGATTTCACATTTCCTGCCTCTGGTCCAAATTCAGATGCTTCCTCTAAGCCAGGCCATTATCCACTTGTTGTTCAGGATGTCACTGGAGAGGATGGATCAGGATCTGAAAGTGAAAGGGAGGGTTCATTTGATGATTACTTCTAG 3363 0.3869 MGVAENIVVGSHVWVPDPELVWIDGQVLSIKGKEAEIQLSDGNKVGSSLSKLHPKDEDAPANGVDDMTKLAYLHEPGVLYNLKNRYDINEIYTYTGNILIAINPFKNIEDLYDVNVMKRYKGAAVGDLSPHVFAIAEAAYRAMINEEKNNSILVSGESGAGKTETTKMIMQYLAFLGGHNASEGRTVEKQVLESNPVLEAFGNAKTVKNSNSSRFGKFVEIQFDKHGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCASPPEDKEKYKLGDPKSFHYLNQSNCYELVGINAAQEYLSTKRAMEVVGINQEEQEAIFRVIAAILHLGNINFAKSEEETDSSVLENEESKLHLQITAELLMCDQISVVIICNSFLFVNITYLLNYFLFRCDPSALEDALCKRVMITPEEVIKRSLDPLGATVSRDGLAKTLYSRLFDWLVQKINVSIGQDPESKCLIGVLDIYGFESFKNNSFEQFCINFTNEKLQQHFNQHVFKMEQERYTKEGIDWSYLEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFATKLYQTFKDHKRFIKPKLARSDFTVVHYAGEVQYQSEQFLDKNKDYVVPEHQDMLSTSRCSFVTRLFPPLTEETSKSAKFSSIGSRFKLQLQQLMDTLNLTEPHYIRCVKPNTVLQPAIFDNMNVIQQLRSGGVLEAVRIKIAGFPTHRTFQEFLTRLGILAPEVLRGNIDEKEACKTILEKAGLTGYQIGQTQIFLRAGQMAELDALRARLLYGSATVIQKHTRRYPRRKEYVALFKSSIFMQSICRGELARRKFYHLRRSKAAVRIQKHTRGKLSRKKYSKIKVAAIYLQAAFRAMDAKDKLNKLRNTKKNSASITIQSYYRRHRALLEYKTLKKSAIISQSVNDSVEKDEDKVLDNKTISVEAVSNVVQEEPSSTFQEEPSNASQEEPSCTIEEEMLNAVQEELTITSEHVERTEAIRESHSPCPLQGSETVEVLTEEIKKLKVMLQAEKVRADECERKYVEAQGSSEELRKKMISSMSSQVADLKMILSTSSRLSSTFRPIARVDVASSNSDTSSTDSDFTFPASGPNSDASSKPGHYPLVVQDVTGEDGSGSESEREGSFDDYF 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00772 1120 Pfam Myosin N-terminal SH3-like domain 10 45 IPR004009 GO:0003774|GO:0005524|GO:0016459
Adu02g00772 1120 ProSiteProfiles IQ motif profile. 789 816 IPR000048 GO:0005515
Adu02g00772 1120 MobiDBLite consensus disorder prediction 1062 1120 - -
Adu02g00772 1120 Gene3D - 696 762 - -
Adu02g00772 1120 MobiDBLite consensus disorder prediction 1062 1087 - -
Adu02g00772 1120 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 811 892 IPR027417 -
Adu02g00772 1120 Coils Coil 986 1027 - -
Adu02g00772 1120 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Adu02g00772 1120 PRINTS Myosin heavy chain signature 458 486 IPR001609 GO:0003774|GO:0005524|GO:0016459
Adu02g00772 1120 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Adu02g00772 1120 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Adu02g00772 1120 PRINTS Myosin heavy chain signature 511 539 IPR001609 GO:0003774|GO:0005524|GO:0016459
Adu02g00772 1120 MobiDBLite consensus disorder prediction 1105 1120 - -
Adu02g00772 1120 ProSiteProfiles IQ motif profile. 835 864 IPR000048 GO:0005515
Adu02g00772 1120 ProSiteProfiles Myosin motor domain profile. 62 761 IPR001609 GO:0003774|GO:0005524|GO:0016459
Adu02g00772 1120 Gene3D - 470 652 - -
Adu02g00772 1120 PANTHER MYOSIN MOTOR DOMAIN PROTEIN AND DIL DOMAIN PROTEIN 389 1060 - -
Adu02g00772 1120 PANTHER MYOSIN MOTOR DOMAIN PROTEIN AND DIL DOMAIN PROTEIN 6 369 - -
Adu02g00772 1120 Gene3D - 252 307 - -
Adu02g00772 1120 CDD MYSc_Myo11 76 749 IPR036018 -
Adu02g00772 1120 ProSiteProfiles IQ motif profile. 863 889 IPR000048 GO:0005515
Adu02g00772 1120 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 812 IPR027417 -
Adu02g00772 1120 Pfam IQ calmodulin-binding motif 814 832 IPR000048 GO:0005515
Adu02g00772 1120 Pfam IQ calmodulin-binding motif 789 807 IPR000048 GO:0005515
Adu02g00772 1120 Pfam IQ calmodulin-binding motif 865 884 IPR000048 GO:0005515
Adu02g00772 1120 Gene3D Myosin VI head, motor domain, U50 subdomain 308 448 - -
Adu02g00772 1120 Gene3D Kinesin motor domain 62 695 IPR036961 -
Adu02g00772 1120 SMART iq_5 763 785 IPR000048 GO:0005515
Adu02g00772 1120 SMART iq_5 834 856 IPR000048 GO:0005515
Adu02g00772 1120 SMART iq_5 811 833 IPR000048 GO:0005515
Adu02g00772 1120 SMART iq_5 862 884 IPR000048 GO:0005515
Adu02g00772 1120 SMART iq_5 786 808 IPR000048 GO:0005515
Adu02g00772 1120 Pfam Myosin head (motor domain) 64 368 IPR001609 GO:0003774|GO:0005524|GO:0016459
Adu02g00772 1120 Pfam Myosin head (motor domain) 389 749 IPR001609 GO:0003774|GO:0005524|GO:0016459
Adu02g00772 1120 ProSiteProfiles IQ motif profile. 812 838 IPR000048 GO:0005515
Adu02g00772 1120 MobiDBLite consensus disorder prediction 922 942 - -
Adu02g00772 1120 Gene3D - 815 864 - -
Adu02g00772 1120 Gene3D - 764 814 - -
Adu02g00772 1120 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Adu02g00772 1120 SMART MYSc_2a 56 762 IPR001609 GO:0003774|GO:0005524|GO:0016459
Adu02g00772 1120 PANTHER MYOSIN 389 1060 - -
Adu02g00772 1120 PANTHER MYOSIN 6 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00772 Adu-Chr2 12005848 12017354 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00772 1 1028 Myosins gene family AT1G54560 61.217 0.0 1315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00772 K10357 - tcc:18613193 1350.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g00772 02 12005848 12017354 Adu02g00772 02 12005848 12017354 ECH