Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00742 ATGATCAAGGACGCTATTGTTACGTTGAAGGAGAAAAACGGTTCGAGCCAATACGCGATTCAGAAGTTTCTCGAAGAAAAGCATAAGCAGTTTCCAACGAACTTCAGAAAGCTTCTTTTGTTCAATTTGAAGAAGCTCGTAGCTTCTGGAAAGCTCGTTAAGGTTAAAGGTTCCTTCAAGCTTCCGGCATCAAAGGCGCCAGCATCATCAGCGCCTTCGCAGGCAAAGAAGCCCGCGGCTACTAAGACTAAGACCAAGTCCAAGCCTAAGCCTAAGCCTAAGCCTAAGCCCGCTGTCAAGGTGAAGGCAACAAAAGCAAAGACAACCAAGACTAAATCGGTGAAATCAGTTTCAGCTAAGTCTAAGCCCAAGCCCGCTCCAAAGCCCAAGGCTGTGGCGAAGCCTAAAGCAGCTGCAGCAGCGAAGCCCAAGGCTGCTGCAGCTAAGACCAAAGCAAAGCCCAAGGCAGCTGCTAAGCCACCGGCAAAAGTGTCGAGGATGTCGACTAGGGCTTCGCCAGGAAAGAAGGCTGCACCTGCCGCAAAGCCTGCAGCAAAGAAGGTTGCGGCAGCGAAGAAGAGCGTGAAGCCCAAGAGCGTAAGGTCTCCGGCGAAGAGGGCTTCGGTGAAGAGGGGCGGAAGGAAGTGA 648 0.5185 MIKDAIVTLKEKNGSSQYAIQKFLEEKHKQFPTNFRKLLLFNLKKLVASGKLVKVKGSFKLPASKAPASSAPSQAKKPAATKTKTKSKPKPKPKPKPAVKVKATKAKTTKTKSVKSVSAKSKPKPAPKPKAVAKPKAAAAAKPKAAAAKTKAKPKAAAKPPAKVSRMSTRASPGKKAAPAAKPAAKKVAAAKKSVKPKSVRSPAKRASVKRGGRK 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00742 215 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 1 63 IPR005818 GO:0000786|GO:0003677|GO:0006334
Adu02g00742 215 PANTHER HISTONE H1.1 1 212 - -
Adu02g00742 215 SMART h15plus2 1 58 IPR005818 GO:0000786|GO:0003677|GO:0006334
Adu02g00742 215 MobiDBLite consensus disorder prediction 189 215 - -
Adu02g00742 215 SUPERFAMILY "Winged helix" DNA-binding domain 1 72 IPR036390 -
Adu02g00742 215 PANTHER HISTONE H1 1 212 - -
Adu02g00742 215 CDD H15 1 71 IPR005818 GO:0000786|GO:0003677|GO:0006334
Adu02g00742 215 MobiDBLite consensus disorder prediction 61 215 - -
Adu02g00742 215 Pfam linker histone H1 and H5 family 1 61 IPR005818 GO:0000786|GO:0003677|GO:0006334
Adu02g00742 215 MobiDBLite consensus disorder prediction 81 109 - -
Adu02g00742 215 Gene3D - 1 73 IPR036388 -
Adu02g00742 215 PRINTS Histone H5 signature 8 25 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Adu02g00742 215 PRINTS Histone H5 signature 84 98 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Adu02g00742 215 PRINTS Histone H5 signature 118 135 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Adu02g00742 215 PRINTS Histone H5 signature 140 159 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00742 Adu-Chr2 11063656 11064803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00742 1 92 Single Myb Histone (SMH) Gene Family AT1G49950 38.043 2.77e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00742 K11275 - cpap:110814810 104.375