Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00726 ATGGAGAATTGTAGCTATGAGAAAGTAGGTTTGAACCTTGAGGCAACAGAGTTGAGGTTGGGTTTGCCAGGCAGTGCTGATGAACATGATGAGAAACTCTCATCATGTAGTTACTCCTCATCATCATCATCAAGTGTTGTTATTAGAAGCAAGAAGAGATCTTCACCTGAAGAATCCATTGATGATGAGGAAGAGCTCAAAAGCAACAAGAGAACCATGATTTCTCATCATAATGATGACCAAGACAAAAATGTCCCACCCTCAAAAGCACAAGTAGTAGTGGGGTGGCCACCAATTAGATCTTACAGGAAGAACAATGGTGTACAACAACAACAACAAGAACAAAAGAAGAAGGGAGAAGAGGTGTATGTGAAAGTGAGCATGGCAGGTGCACCTTACTTGAGGAAGATTGATCTCAATTTTTACAATACCTACCAACAATTACTCTTGGCTTTGGAAAATATGTTCAACTGCACTTTTGGTGAATATTCAGAAAGAGAAGGCTACAATGGATCTGAATTTGCTCCAACTTATGAAGACAAAGATGGTGATTGGATGTTGGTTGGAGATGTGCCATGGAACATGTTCATTTCTTCCTGCAAGAGGCTAAGGATTGTGAAAGGATCAGAAGCTAAGGGATTGGGTTGTTTATGA 654 0.4021 MENCSYEKVGLNLEATELRLGLPGSADEHDEKLSSCSYSSSSSSSVVIRSKKRSSPEESIDDEEELKSNKRTMISHHNDDQDKNVPPSKAQVVVGWPPIRSYRKNNGVQQQQQEQKKKGEEVYVKVSMAGAPYLRKIDLNFYNTYQQLLLALENMFNCTFGEYSEREGYNGSEFAPTYEDKDGDWMLVGDVPWNMFISSCKRLRIVKGSEAKGLGCL 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00726 217 Pfam AUX/IAA family 15 215 IPR033389 -
Adu02g00726 217 MobiDBLite consensus disorder prediction 24 67 - -
Adu02g00726 217 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 4 215 IPR003311 GO:0005634|GO:0006355
Adu02g00726 217 ProSiteProfiles PB1 domain profile. 121 213 IPR000270 GO:0005515
Adu02g00726 217 PANTHER AUXIN-INDUCED PROTEIN 4 215 - -
Adu02g00726 217 MobiDBLite consensus disorder prediction 35 50 - -
Adu02g00726 217 MobiDBLite consensus disorder prediction 51 67 - -
Adu02g00726 217 Gene3D - 115 217 - -
Adu02g00726 217 SUPERFAMILY CAD & PB1 domains 119 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00726 Adu-Chr2 10694418 10695788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00726 105 214 B3 DNA Binding Superfamily AT2G46530 33.636 7.61e-12 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Adu02g00726 AUX_IAA 5.2e-61 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00726 K14484 - gmx:100792134 249.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01155 06 15273098 15274420 Adu02g00726 02 10694418 10695788 PCT