Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00701 ATGCTTCACGCTCCACTACAATCATCGCTTCTCTTCGTTTCCTTCTTAGGGTTTCTTATTCTTCTTTCCATAATCAAAATCCCTTGCGTTCGCGGAGAGTCTTCCACCTGCTTGACGGTTTACAGAAACGGCGGTGCTCCCGCGGTCTTTAAATCCCCGAAATGTCCCCGATGGAAGCTTCCCGAAGGCCAAGGTGAAGACGACGATTCCGATTACCACCGTAGTCGCCGATCTCCGCCTCATGCGACGCCGCGTTGCCAGTCCGCCATGCTCCAGGGCAGCCGTTCCTCCCAGGAGGACCGCACTCTCTGCGTCCTCGATCTCCGGATTCCGTTTCCCGATGCGGATGGGATCAGGGAGGTTGCGGTGGGACTCGTGGCAGTTTTTGACGGGCACAATGGTGCTGAAGCTAGTGAAATGGCGTCAAAGCTTCTGATGGAGTATTTTGTATTGCACACCTATTTTTTACTTGATGCAGCTTTTTCTGTTATATCAAAAACAAGGGGAGCAGTGCATCACCAGAGAGAGCACAATCGTTTGAACATGATGCGTAGGTGGAAGGAGATTCTAGGTTGGCATGAGCTGCATTTTGAAAGGTTCCAAAATACATTTTCTGCAAATTTTGATGATTCTTTTCACTTGGAAATTTTGAAGGAAGCATTATTGAGAGCTATCCATGATATTGATGCAAAATTTTCTGAGGAAGCCTTCAGAAATAGTCTTCATTCAGGGTCTACGGCAATCATTATATTGATGGCAGATGATAACATTTTAGTTGCCAATATTGGAGATTCTAAGGCTTTCTTGTGCTCTGAAAATTTTCAGTCTCCTAGAGAGGCCAAAGACTTATTACTGAAGCAATATAGGCAGAAAGAGCTTGATGGTTCTGTTGCTGTGTGGAATCGTGAAAAGTATAAGTTAGCTTCCTCCCATGGACTGACTCATTTTGCTGTAAAAGAATTGACCAGTGATCATCACCCAGACAGAGATGATGAAAGGATTCGGGTGGAAGCAGCTGGTGGGCAAGTTATAAATTGGGGGGGAGTGCCTCGTGTAAATGGCCAGCTGGCTATTACACGGGCAATTGGTGATGTATTCTTTAAAAGGTACGGTGTTATATCTGTGCCAGAAGTGACTGATTGGCAGCCTCTGACTGCCAATGATAGCTATTTAGTGGCTGCATCCGATGGTGTTTTTGAGAAGATGAGCATGCCAGAACTTGCTTCAAGAAGTTTAGCTAATGACGTCATATCTGATGTAATGCACTTGAGGCATCCTCATGCGGTGGATACCAAGTTTAAGCGTATATTGGTTGAAGTGAAACATGGAGATTTTGGATGTTTTTATTTGTCTGAAAATCTTGATGAACTTGTGGACTCTAAGCAGCCTACCAAAAGTACTGACTGGGAAGATTATTTATATGAACTACCTCAGCCTGTACCAGATACACATCAACATTCTGTAAATGGTCCAGTATATTTGTATGATAACCAAAACTTCTGCTTACAACTTGGTCCGACTGTTAATGAATCTAAGGAACAATGCATAAATCCTGAAGCATTTGCAAATTTTATTGGTCTTCTTGAATCAATTCCTTTACATGATACTGGTTCACATAATGGATCCTCTGGTTATTCAATGCCTGAATCAAGGTACAAACTAAAGAAGAGTTTCGGTCGTGGATCATATGGTGAAGTATGGTTAGCTTTTCATTGGAATTGTAATGAAGGGATTAATGCTGCAGAAATGAGCAACAATGACAATAATAGAAACGACAGCTCAAACACCAATGATTTCCAGGATGCTTCCACTAACTATACTCTGTACATTTTGAAGCGTATAATGGTAGAGAGAGGGTCTGCTGTTTACTTAAGTGGCCTGAGGGAGAAATATTTTGGAGAAACTTTTTTAAATGCCTCCTCAAGCTTTGAAGATCTGCTATCAGCTGAAAAACCAAACTGTCTCTTGGAAACATCACAATTTGGGTTTGAGAATACATTTTCAAACAGGTCAAAAAGATCTGTATATGAAGAAGGCTTGAACCATATTGTAAGATATGTGGAGTCTTTTGAATCTCGGTCCAATGAAATTTGGCTTGTATTCAGTTTTGAAGGCGTATCGTTGTCTAAACTTTTGCATACTGTGGAAGATCCATATGATACTGCTGAGAAAGAAAAGACTGAGCAAGTAAAACATGTCCAAATACTGCGTCCATCGAAGTGGTGGCATTGGTTGAAAACAACAGAAGAAGGGCAAGAGGAAATGCGCAACCTTATCTGGCAGCTGTTTCTGGCGCTGAAATCATGTCACGATCGCAATATTACACACAGGGACATTAAACCTGAAAATATGGTGATATGCTTTGAAGATCAGGAGACTGGAAGATGTTTGAAAGATATACCGACTAAACTAAATAGTTTCTCCACCAAAATGCGTGTTATAGACTTTGGCAGTGGAATTGATGAATTCACATTGAAGCATTTATATGGTTCAACTGGGCCTTCTAGGGCTGAACAAACTTATGAGTATACACCTCCTGAAGCTTTGCTAAATGCTACGTGGTATCAAGGCCCAACAAGCTCAACTTTGAAATATGACATGTGGAGTGTTGGTGTTGTAATGTTAGAGTTGGTCTTAGGGACACCAAATGTTTTCCAGATCGATGCTTTAACACAAACTCTTTTGGACCAGCATCTTGACGGCTGGAATGAGGGTGTGAAGGAGCTGGCTTACAAACTCAGATCATTCATGGAATTGTGTATCTTAATCCCTGAGATATCCAGAAGTTCCTCAAAAAAGTATCACACAGCTAACCAGGCTGGCGTTTCACCTGCATCTTGGAAATGCTCGGAAGAATTCTTTTCTCATCAAATAAAGAGCCGAGATCCTCTTAAAATAGGTTTTTCAAATATCTGGGCGTTGCGGTTAGTGCGCCATCTGTTACAGTGGGACCCAGAGGACCGGATAAGCGTTGATGAGGCATTGCAGCATCCCTATTTCCAACCTCCCCCGAGAGGATGA 3021 0.4227 MLHAPLQSSLLFVSFLGFLILLSIIKIPCVRGESSTCLTVYRNGGAPAVFKSPKCPRWKLPEGQGEDDDSDYHRSRRSPPHATPRCQSAMLQGSRSSQEDRTLCVLDLRIPFPDADGIREVAVGLVAVFDGHNGAEASEMASKLLMEYFVLHTYFLLDAAFSVISKTRGAVHHQREHNRLNMMRRWKEILGWHELHFERFQNTFSANFDDSFHLEILKEALLRAIHDIDAKFSEEAFRNSLHSGSTAIIILMADDNILVANIGDSKAFLCSENFQSPREAKDLLLKQYRQKELDGSVAVWNREKYKLASSHGLTHFAVKELTSDHHPDRDDERIRVEAAGGQVINWGGVPRVNGQLAITRAIGDVFFKRYGVISVPEVTDWQPLTANDSYLVAASDGVFEKMSMPELASRSLANDVISDVMHLRHPHAVDTKFKRILVEVKHGDFGCFYLSENLDELVDSKQPTKSTDWEDYLYELPQPVPDTHQHSVNGPVYLYDNQNFCLQLGPTVNESKEQCINPEAFANFIGLLESIPLHDTGSHNGSSGYSMPESRYKLKKSFGRGSYGEVWLAFHWNCNEGINAAEMSNNDNNRNDSSNTNDFQDASTNYTLYILKRIMVERGSAVYLSGLREKYFGETFLNASSSFEDLLSAEKPNCLLETSQFGFENTFSNRSKRSVYEEGLNHIVRYVESFESRSNEIWLVFSFEGVSLSKLLHTVEDPYDTAEKEKTEQVKHVQILRPSKWWHWLKTTEEGQEEMRNLIWQLFLALKSCHDRNITHRDIKPENMVICFEDQETGRCLKDIPTKLNSFSTKMRVIDFGSGIDEFTLKHLYGSTGPSRAEQTYEYTPPEALLNATWYQGPTSSTLKYDMWSVGVVMLELVLGTPNVFQIDALTQTLLDQHLDGWNEGVKELAYKLRSFMELCILIPEISRSSSKKYHTANQAGVSPASWKCSEEFFSHQIKSRDPLKIGFSNIWALRLVRHLLQWDPEDRISVDEALQHPYFQPPPRG 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00701 1006 SMART serkin_6 552 1000 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g00701 1006 PANTHER ALPHABET, ISOFORM E-RELATED 24 407 - -
Adu02g00701 1006 PANTHER ALPHABET, ISOFORM E-RELATED 417 539 - -
Adu02g00701 1006 Gene3D Transferase(Phosphotransferase) domain 1 740 1001 - -
Adu02g00701 1006 Pfam Protein kinase domain 682 1000 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g00701 1006 SUPERFAMILY PP2C-like 83 409 IPR036457 -
Adu02g00701 1006 MobiDBLite consensus disorder prediction 60 95 - -
Adu02g00701 1006 SMART PP2C_4 77 417 IPR001932 -
Adu02g00701 1006 ProSitePatterns Serine/Threonine protein kinases active-site signature. 774 786 IPR008271 GO:0004672|GO:0006468
Adu02g00701 1006 MobiDBLite consensus disorder prediction 81 95 - -
Adu02g00701 1006 ProSiteProfiles PPM-type phosphatase domain profile. 85 479 IPR001932 -
Adu02g00701 1006 PANTHER PROTEIN PHOSPHATASE 2C 50-RELATED 24 407 - -
Adu02g00701 1006 PANTHER PROTEIN PHOSPHATASE 2C 50-RELATED 417 539 - -
Adu02g00701 1006 SUPERFAMILY Protein kinase-like (PK-like) 549 1002 IPR011009 -
Adu02g00701 1006 Pfam Protein phosphatase 2C 216 408 IPR001932 -
Adu02g00701 1006 ProSiteProfiles Protein kinase domain profile. 552 1000 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g00701 1006 Gene3D - 81 427 IPR036457 -
Adu02g00701 1006 MobiDBLite consensus disorder prediction 60 78 - -
Adu02g00701 1006 CDD PP2Cc 92 403 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00701 Adu-Chr2 10054206 10068500 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00701 616 1004 PP2C-type Phosphatase Gene Family AT3G63340 65.473 1.03e-179 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSKL Adu02g00701 Pkinase 3.1e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00701 - - lja:Lj5g3v1003920.1 1339.32