Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00671 ATGGCTACTCCAACTAAACCAATGGCCGTAATGTTGTCTGAATCTTTGGAACACAAGGGAAAGGATATCACTGAATTAAATGGTAACATACTTCAATCCCCTATAAGTCAACAGCCCCATAGCTCCTCTGATGGTTCAGTAGCTATTCTTTGGGACATTGAAAACTGTCCTGTTCCAAGTGATGTCCGCCCTGAAGACGTAGCAGGAAATATAAGGATGGCGTTGCAAGTGCATCCAGTAATTCAAGGAACTGTTATGGTATTTTCTGCTTATGGTGACTTCAACGCTTTCCCTAAGCGACTTCGAGAGGGATGTCTAAGAACTGGTGTTAATCTCATCGATGTTCCTAATGGGAGAAAAGATGCTGCTGATAAAGCAATCTTGGTTGACATGTTTTTATTTGCTCTTGACAACCCTCCCCCATCATCTATTATGCTAATATCTGGAGACGTTGACTTTGCCCGAGCACTTCACATTCTTGGACAACGGGGATACACTATAATTCTTGTCATCCCTTCTGGGGTGGGTGTTTCATCTGCTTTATGCAATGCCGGAAAGTTTGTCTGGGATTGGCCTAGCGTTGCTCGTGGAGAAGGATTTGTTCCCCCGGCAAAGGCTTTAGTACCACCTCGTGGAGGTTCAGTTGAGGTTGCTGGATATTTGATGGGGTGCCATATTAATGACAACTTCGAGGGACAAAATGAGGAAGAAGCAATAGTTTATAGAGGGATGTCACAGAGATTATATAACTCAAGGGATTTCTCTATGGTTTCACAATCTCTATCTGAATACAATTGTACCGCATCGAACATGGCTGGCTTACCGACAACTATGAGATCACACAGCCTTCCACCTGGGATGATTGATGTTTCAGGAATATCTATGCCTTCTAGTGACAATAATGAAGGCCAGCTTTGGGGCCCTATGTCTAGCGATTTAAATGTTCTCAAAGGCCACTTGGTAAAGTTGCTTGAACTTTCTGGAGGGTGCCTGCCTCTGGCTCGAGTTCCAACAGAGTATCAGAAAGCTTATGGAAGAACTCTTTATGTATCTGATTATGGAGCAATTAAGTTAGTCAATCTTTTCAAGAAGATGGGTGATACAGTGGCAGTGGAAGGGAAAGGTCAACGTAAATTTGTGTATCTCAGAAACTTCAAGGTAGGCCCGAGCGCTCCCCCATTGGCTCTAGCAAAGAAAGACAAGAAAGGAAAGGGGCTTCCAGAAGAGAATACGAATACTGTCACCGGTGGTGGCTCTTCAGATGAGTTCTCAGATGAAGAAAGACTAGTCATGGAAGAACATGACGAGAGAAATTGTGTAGGAAAGGGCAGTCAAAGGAGAGCAGCTATCAATGACCGTGCTCTTGAGCAGTTCAAGTTTGAGCTTCAAGAGATTCTAGTCAGCTACTCGTGTCGAATATTCCTAGGTTGTTTTGAGGATATATACCAACAAAGGTACAAGAGACAATTGGAATATCAGAGACTTGGAGTGAACAAGTTGGAGGATTTGTTCGAGAAAGTCAATGATATTGTAGTATTGGTTGAGGAACCAGGAAGCAAGAGGAAGTTCCTTGCTCCAGTGGGGAGTTAG 1590 0.4352 MATPTKPMAVMLSESLEHKGKDITELNGNILQSPISQQPHSSSDGSVAILWDIENCPVPSDVRPEDVAGNIRMALQVHPVIQGTVMVFSAYGDFNAFPKRLREGCLRTGVNLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFARALHILGQRGYTIILVIPSGVGVSSALCNAGKFVWDWPSVARGEGFVPPAKALVPPRGGSVEVAGYLMGCHINDNFEGQNEEEAIVYRGMSQRLYNSRDFSMVSQSLSEYNCTASNMAGLPTTMRSHSLPPGMIDVSGISMPSSDNNEGQLWGPMSSDLNVLKGHLVKLLELSGGCLPLARVPTEYQKAYGRTLYVSDYGAIKLVNLFKKMGDTVAVEGKGQRKFVYLRNFKVGPSAPPLALAKKDKKGKGLPEENTNTVTGGGSSDEFSDEERLVMEEHDERNCVGKGSQRRAAINDRALEQFKFELQEILVSYSCRIFLGCFEDIYQQRYKRQLEYQRLGVNKLEDLFEKVNDIVVLVEEPGSKRKFLAPVGS 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00671 529 ProSiteProfiles OST-type HTH domain profile. 454 528 IPR025605 -
Adu02g00671 529 MobiDBLite consensus disorder prediction 393 423 - -
Adu02g00671 529 Gene3D - 310 381 IPR041966 -
Adu02g00671 529 Gene3D - 450 523 IPR041966 -
Adu02g00671 529 ProSiteProfiles OST-type HTH domain profile. 312 384 IPR025605 -
Adu02g00671 529 CDD LOTUS 313 382 - -
Adu02g00671 529 Pfam OST-HTH/LOTUS domain 455 519 IPR025605 -
Adu02g00671 529 Pfam OST-HTH/LOTUS domain 315 379 IPR025605 -
Adu02g00671 529 CDD PIN_limkain_b1_N_like 47 172 - -
Adu02g00671 529 PANTHER LIMKAIN B LKAP 19 524 IPR024768 GO:0005777|GO:0010468|GO:1903231
Adu02g00671 529 PANTHER - 19 524 - -
Adu02g00671 529 CDD LOTUS 455 518 - -
Adu02g00671 529 Gene3D - 39 192 - -
Adu02g00671 529 Pfam NYN domain 47 185 IPR021139 GO:0004540
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00671 Adu-Chr2 9376151 9377740 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00671 45 197 C2H2 Transcription Factor Family AT5G61190 43.137 1.49e-28 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00671 - - ahf:112715639 1019.61