Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00620 ATGCCTTCCACTGCAACACGTGCAAAACCAATATCTATGATATTCCATTTTCGGTATTCGACTCTCTACAAAACCCTAATAAAGTTGGCTACTTGGCCTTTCCGCCTATCTCTATCTGCTAGTTTTGGATCTCATCATCTCAGAGGGGCGTCACTTGGAAGCTGGTTTTCCACGTCATCATCGAGAGCTTCACGGTTTTCTTCTTTGAAGCGAACCGAAGCCATGGCCTTAATCCTGCATGCAGGTAAATCAAACAAAAATGCTTACAAGGCACTCATTGCAGCTGAGTATGCCGGCGTGCAGGTTCAGTTGGCCCCCAACTTTGAGATGGGTGTGTCTAATAAAACCCCTGAATTTCTCAAGATGAATCCTATTGGCAAGGTTCCTGTGTTAGAGACACCGGAGGGTCCTGTATTTGAGAGCAATGCAATTGCTCGTTATGTTGCTCGGGTAAAGGGGGACAACACTTTGTATGGTTCTTCCTCCATTGATTATGGCCACATCGAGCAATGGATTGATTTTTCATCATTGGAGATTGATGCTAATATTGGCAGGTGGTTCGCCCCAAGAAAGGGATTTGGACCTTACCTTCCTCCGGCCGAGGAGGCTGCAATTTCTTCCCTAAAGAGAGCTTTGGGTGCGTTGAACACTCATCTTGCCACTAATACTTACCTGGTTGGACACACTGTGACCCTGGCTGACATCATAACAACATGCAACTTGTATTTGGGTTTCACTAATATCATGATCAAGAGTTTCACCTCAGAGTTTCCTCATGTCGAGAGATACTTCTGGACCTTGGTTAATCAGCCAAACTTCCGCAAGATACTTGGTCAAGTCAAGCAGGCGGACGCTGTCCCCCCGGTTCCATCTGCTAAGAAGCCTGCCCAGCCAAAAGAATCTAAGCCCAAGGCGAAGGATGAGCCAAAGAAAGAGGCGAAAAAAGAACCGGAAAAGCCCAAAGTAGAAGAAGAGGAGGAAGAAGCTCCCAAGCCAAAACCCAAGAATCCTCTTGATCTTCTCCCCCCAAGTAAGATGATATTGGATGAATGGAAAAGGCTCTATTCGAACACCAAAACTAATTTCCGTGAGGTTGCAATCAAAGGATTTTGGGACATGTATGATCCGGAAGGATATTCTTTGTGGTTTTGTGATTACAAGTACAATGATGAGAACACTGTTTCGTTTGTGACAATGAACAAAGTTGGTGGGTTTCTTCAGCGGATGGATTTGGCCCGTAAGTATGCATTTGGAAAGATGCTTGTGATTGGATCCCAGCCACCATTCAAGGTGAAGGGGTTGTGGCTTTTCCGTGGTCCAGAAATCCCCAAGTTTGTGATGGATGAATGCTATGACATGGAGCTTTATGAGTGGAGTAAGGTTGACATATCTGATGAAAATCAAAAGGAACGCGTCAATCAGATGATTGAAGATCATGAACCATTTGAGGGAGAGTCTCTTTTGGATGCCAAGTGCTTTAAGTAA 1485 0.4492 MPSTATRAKPISMIFHFRYSTLYKTLIKLATWPFRLSLSASFGSHHLRGASLGSWFSTSSSRASRFSSLKRTEAMALILHAGKSNKNAYKALIAAEYAGVQVQLAPNFEMGVSNKTPEFLKMNPIGKVPVLETPEGPVFESNAIARYVARVKGDNTLYGSSSIDYGHIEQWIDFSSLEIDANIGRWFAPRKGFGPYLPPAEEAAISSLKRALGALNTHLATNTYLVGHTVTLADIITTCNLYLGFTNIMIKSFTSEFPHVERYFWTLVNQPNFRKILGQVKQADAVPPVPSAKKPAQPKESKPKAKDEPKKEAKKEPEKPKVEEEEEEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTMNKVGGFLQRMDLARKYAFGKMLVIGSQPPFKVKGLWLFRGPEIPKFVMDECYDMELYEWSKVDISDENQKERVNQMIEDHEPFEGESLLDAKCFK 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00620 494 Gene3D Glutaredoxin 74 148 - -
Adu02g00620 494 MobiDBLite consensus disorder prediction 284 341 - -
Adu02g00620 494 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 75 494 IPR044628 GO:0004364
Adu02g00620 494 Pfam Elongation factor 1 gamma, conserved domain 333 440 IPR001662 GO:0003746|GO:0006414
Adu02g00620 494 SMART EF1G_2 333 441 IPR001662 GO:0003746|GO:0006414
Adu02g00620 494 CDD GST_N_EF1Bgamma 79 150 - -
Adu02g00620 494 SFLD Glutathione Transferase (cytosolic) 79 264 IPR040079 -
Adu02g00620 494 SUPERFAMILY GST C-terminal domain-like 147 283 IPR036282 -
Adu02g00620 494 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 334 494 IPR036433 GO:0003746|GO:0006414
Adu02g00620 494 Pfam Glutathione S-transferase, C-terminal domain 205 271 IPR004046 -
Adu02g00620 494 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 75 156 IPR004045 -
Adu02g00620 494 SFLD Main (cytGST) 79 264 - -
Adu02g00620 494 MobiDBLite consensus disorder prediction 297 334 - -
Adu02g00620 494 CDD GST_C_EF1Bgamma_like 164 284 - -
Adu02g00620 494 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 161 289 IPR010987 -
Adu02g00620 494 SUPERFAMILY eEF1-gamma domain 334 494 IPR036433 GO:0003746|GO:0006414
Adu02g00620 494 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 334 494 IPR001662 GO:0003746|GO:0006414
Adu02g00620 494 PANTHER - 75 494 - -
Adu02g00620 494 Pfam Glutathione S-transferase, N-terminal domain 76 150 IPR004045 -
Adu02g00620 494 Gene3D - 154 287 - -
Adu02g00620 494 SUPERFAMILY Thioredoxin-like 70 159 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00620 Adu-Chr2 8404363 8407280 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00620 75 494 Eukaryotic Initiation Factors Gene Family AT1G57720 76.190 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00620 K03233 - gmx:547637 698.353