Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00597 ATGAGTTTTGGAGGGTTTCTAGACAACAATTCCGGTGGCGGCGACGACGGTGGCGGTGGCGGCGGTGTGAGAAACATAGTAGAAATTCCATATAACAACGGTGGTGGTGGCACTACCAAGAACAACATCATCAACAACGATAATAATAGAACAACAATGCCCTCTGGTGCAATCTCACAGCCTCGCCTTTTAACAACTACTCCAACTTTGGCCAAATCAATGTTCAACTCACCTGGCCTCTCTCTAGCACTTCAAACGAATCTTGATGGACAAGGGGATGTGAATAACAACAACATTATGGGGAGTGAGAACAACAACAATAATTATGAGGGAAGTAATGGAGGATTGAGAAGGAGCAGAGAAGAAGAACATGAAAGCAGATCTGGAAGTGATAACATGGATGGTGCCTCCGGCGATGAACAAGATGCTGCCGACAACAATAATCCCAAAAGGAAAAAACGTTATCACCGACACACTCCTCAGCAAATACAAGAGCTTGAATCGTTGTTTAAGGAGTGTCCCCATCCTGACGAGAAACAAAGGCTAGAACTTAGTAAAAGGCTTTGCTTGGAAACAAGGCAGGTGAAGTTTTGGTTCCAAAATCGGAGAACCCAAATGAAGACTCAATTGGAGCGCCATGAGAACACACTCCTAAGGCAAGAGAATGACAAGCTTAGAGCTGAGAACATGTCAATTAGAGATGCAATGAGGAACCCCATGTGTTCAAATTGTGGTGGTCCTGCCATAATTGGTGAGCTTTCACTTGAGGAACAACATCTCAGGATTGAGAATGCAAGACTAAAGGATGAATTAGACCGGGTTTGTGCCCTCGCCGGCAAGTTCTTGGGCCGGCCCATTTCGTCGATGGGCGGGCCCCATCCGTTGCCAAATTCAAGTTTGGAACTTGGGGTTGGCAACAATAACAATGGCTATGGTTGCAACTTGAGCATAAATGTGCCTAATAGCTTGCCTTTGGGGCCGGAATTTGGGGTGAATTTGTCTAGTCCTTTGGGTATGGTTTCCGGGCCGGCGATCACTCGGCCGCAGCCGAGCGCGGTTGTTGGCGGATTCGATAGGTCAATGGAGAGGTCAATGTTGTTGGAGCTTGGTTTGGCTGCCATGGATGAGTTGGTGAAGATGGCACAAAGTTGTGAGCCACTTTGGATAAGGAGTTTGGAAATTGGAGGAAGGGAAGTGCTTAACCATGAGGAGTATATTAGGACATTCCCTAATCCTTGCATTGCTTTAAGGACTAATTCCTTTGTCTCTGAGGCTTCTAGGGAAACTGGCCTTGTCATCATAAATAGCTTGGCTCTTGTTGAGACTTTAATGGATGCGAATCGATGGGCAGAGATGTTTCCTTGTATGATTGCAAGAACCTCAACCACTGAAGTGATATCCAATGGAATAAACGGTACCAGAAATGGTGCACTTCAACTAATGCATGCGGAGCTTCAAGTTCTATCGCCATTGGTACCAGTTAGAGAAGTGAATTTCCTTCGATTTTGCAAGCAACACGCAGAAGGGGTGTGGGCAGTGGTGGATGTCTCCATTGATGCTATCAGAGAAACTTCTTCTGCCGGTGCCCCAACTTTTGTTAATTGCAGAAGACTCCCTTCTGGCTGTATAGTACAAGATATGCCTAATGGTTACTCCAAGGTGACATGGGTGGAACATGCCGAATACGAGGAAAGGGAAGTTCATCAGTTATATAGAGCCTTGTTGAGCTCTGGCATGGCCTTCGGCGCCCAGCGGTGGATCGCCACCCTACAGCGCCAGTGCGAGTGCCTCGCCATCCTCATGTCTTCTACTCAACCTTCTAGAGACCACTCAGCAATAACTGCAAGTGGTAGGCGCAGCATGCTGAAGCTGGCACAGAGGATGACCAACAACTTCTGTGCCGGAGTGTGCGCCTCCACGGTGCACAAGTGGAACAAGCTCAACAATACCGGCAACACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGATCGTCCTCAGCGCTGCCACGTCAGTGTGGCTCCCAGTCTCGCCGCAGAGGCTGTTCGACTTCCTCCGCGACGAGAGGCTGAGGAGCGAGTGGGACATACTATCCAATGGTGGGCCCATGCAAGAGATGGCCCACATTGCAAAGGGACAGGACCATGGCAACTGCGTCTCCCTCCTTAGAGCCGGTGCAATAAATTCAAATCAAAGTAGCATGTTGATACTTCAAGAGACATGCATAGATGCTGCTGGCTCGCTTGTGGTGTACGCGCCGGTGGATATTCCGGCGATGCACGTGGTAATGAACGGTGGTGATTCTGCTTACGTGGCATTATTGCCTTCTGGGTTTGCGATTGTTCCGGATGGGCCTGCGCCTCGTGGGGCCCAAAATGGTGGCGCCGATGCCAACGGTGGCGATGACCTTGGTGGTGGGGCGCGTGGGAGTGGGTCCCTTTTGACGGTGGCATTTCAGATTCTTGTGAATAGTCTCCCTACGGCCAAGCTCACGGTAGAGTCGGTGGAAACTGTGAACAACCTCATTTCATGCACAGTTCAAAAGATAAAAGCAGCACTTCGGTGTGAAAGTTGA 2583 0.4839 MSFGGFLDNNSGGGDDGGGGGGVRNIVEIPYNNGGGGTTKNNIINNDNNRTTMPSGAISQPRLLTTTPTLAKSMFNSPGLSLALQTNLDGQGDVNNNNIMGSENNNNNYEGSNGGLRRSREEEHESRSGSDNMDGASGDEQDAADNNNPKRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENMSIRDAMRNPMCSNCGGPAIIGELSLEEQHLRIENARLKDELDRVCALAGKFLGRPISSMGGPHPLPNSSLELGVGNNNNGYGCNLSINVPNSLPLGPEFGVNLSSPLGMVSGPAITRPQPSAVVGGFDRSMERSMLLELGLAAMDELVKMAQSCEPLWIRSLEIGGREVLNHEEYIRTFPNPCIALRTNSFVSEASRETGLVIINSLALVETLMDANRWAEMFPCMIARTSTTEVISNGINGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDAIRETSSAGAPTFVNCRRLPSGCIVQDMPNGYSKVTWVEHAEYEEREVHQLYRALLSSGMAFGAQRWIATLQRQCECLAILMSSTQPSRDHSAITASGRRSMLKLAQRMTNNFCAGVCASTVHKWNKLNNTGNTXXXXXXXXXXXXXIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRAGAINSNQSSMLILQETCIDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPAPRGAQNGGADANGGDDLGGGARGSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALRCES 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00597 860 Coils Coil 250 270 - -
Adu02g00597 860 Pfam START domain 371 596 IPR002913 GO:0008289
Adu02g00597 860 ProSiteProfiles 'Homeobox' domain profile. 149 209 IPR001356 GO:0003677
Adu02g00597 860 SMART START_1 368 596 IPR002913 GO:0008289
Adu02g00597 860 CDD homeodomain 151 209 IPR001356 GO:0003677
Adu02g00597 860 SUPERFAMILY Bet v1-like 624 853 - -
Adu02g00597 860 Gene3D - 138 225 - -
Adu02g00597 860 SUPERFAMILY Bet v1-like 360 596 - -
Adu02g00597 860 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 105 857 - -
Adu02g00597 860 MobiDBLite consensus disorder prediction 1 165 - -
Adu02g00597 860 SMART HOX_1 150 213 IPR001356 GO:0003677
Adu02g00597 860 MobiDBLite consensus disorder prediction 788 807 - -
Adu02g00597 860 Pfam Homeodomain 152 207 IPR001356 GO:0003677
Adu02g00597 860 SUPERFAMILY Homeodomain-like 134 209 IPR009057 -
Adu02g00597 860 ProSiteProfiles START domain profile. 359 599 IPR002913 GO:0008289
Adu02g00597 860 Coils Coil 203 235 - -
Adu02g00597 860 CDD START_ArGLABRA2_like 363 595 - -
Adu02g00597 860 MobiDBLite consensus disorder prediction 32 114 - -
Adu02g00597 860 ProSitePatterns 'Homeobox' domain signature. 184 207 IPR017970 GO:0000981|GO:0006355
Adu02g00597 860 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 105 857 IPR042160 -
Adu02g00597 860 MobiDBLite consensus disorder prediction 115 130 - -
Adu02g00597 860 Gene3D - 430 595 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00597 Adu-Chr2 7887303 7894703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00597 1 860 Homeobox Transcription Factor Family AT3G61150 61.538 0.0 986
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Adu02g00597 START 7.8e-54 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00597 K09338 - gmx:100818372 1214.13