Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00596 ATGAATATGATGAGAAGGTTGAAGAGCATTGCTTCTGGCAGGACATCCATTTCTTCAGATCCTGGAGGTGATTCTAGCACGAAAAGAGCTAAGTTTGATCAGGAAACCACAGGGAAAGTCAATGATGAATCGATTACCATAGACAAAGGCGGCCAAGATCAGGAAGATTTTGTAGATGCACAAATGGGGGATGCTGTTGGCACATCAGATGTATCTTCGGTAGCCAAAAATGAAAAGTCAGGTTTTGATCAACTTCCGAAAGAATTGCATGATATGAAAATTGCTGATGAGAAAAGGAAAAAGAACAATGAGAAGGATGTAGAAGCAACTGTAGTGAGTGGTAATGGAACAGAAACAGGTCAAATAATTACAACTGCTATTGGTGGCCGAGATGGACAACCAAAGCAGACAATATCGTACATGGCTGAACGCGTGGTTGGAACTGGTTCTTTTGGAGTTGTTTTTCAGGCTAAGTGCCTCGAGACTGGTGAACCGGTTGCCATAAAGAAGGTTTTGCAAGACAAGAGATATAAGAATAGGGAACTTCAGGTTATGCGCATGCTTGAGCATCCTAATGTTGTGCGACTAAAGCACTGTTTCTTTTCAACTACGGATAAGGATGAGTTGTACCTCAACCTGGTTTTGGAGTATGTTCCCGAAACTGTTTACAAGGTTTCAAAGCAGTTTATTAGGATGCACCAATATATGCCTATCATTAATGTGCAACTTTATACATATCAGATATGCCGTGCATTGAATTATTTACATGAAGTCATTGGCGTCTGTCATCGTGACATCAAGCCCCAGAATTTATTGGTCAATCCTCAGACCCATGAGTTGAAGATATGCGATTTTGGTAGTGCAAAGATGTTGGTTCCCGGTGAACCCAACATATCATACATATGCTCGAGGTACTATAGGGCTCCAGAACTTATATTTGGGGCAACTGAATACACAACTGCTATTGATATGTGGTCTGTCGGTTGTGTTTTGGCTGAGCTCCTTCTAGGACAGCCATTGTTTCCAGGAGAGAGTGGGGTTGATCAGTTAGTAGAGATCATTAAGATCTTGGGAACACCTACCAGAGAAGAAATAAGGTGCATGAATCCCAACTACAATGAATTCAAGTTTCCTCAGATTAAAGCGCACCCGTGGCACAAGGTTTTCAACAAGAAACTGCCACCTGAAGCAGTGGATCTTGTGTCAAGGCTACTTCAATATTCACCAAATCTACGTTGCACTGCGTTGGCTGCATGTGCACACCCATTCTTCGATGATCTACGGGACCCGAATACATGCCTGCCAAATGGGCGACCGCTGCCGCCGTTGTTCAATTTCACTGAAGCAGAACTGGCAAATGCACCTGATGAATTGCGTCAACGTCTCATTCCCGAGCATGCGAGGAGTTCGAGCTGA 1416 0.4329 MNMMRRLKSIASGRTSISSDPGGDSSTKRAKFDQETTGKVNDESITIDKGGQDQEDFVDAQMGDAVGTSDVSSVAKNEKSGFDQLPKELHDMKIADEKRKKNNEKDVEATVVSGNGTETGQIITTAIGGRDGQPKQTISYMAERVVGTGSFGVVFQAKCLETGEPVAIKKVLQDKRYKNRELQVMRMLEHPNVVRLKHCFFSTTDKDELYLNLVLEYVPETVYKVSKQFIRMHQYMPIINVQLYTYQICRALNYLHEVIGVCHRDIKPQNLLVNPQTHELKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSVGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIRCMNPNYNEFKFPQIKAHPWHKVFNKKLPPEAVDLVSRLLQYSPNLRCTALAACAHPFFDDLRDPNTCLPNGRPLPPLFNFTEAELANAPDELRQRLIPEHARSSS 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00596 471 SUPERFAMILY Protein kinase-like (PK-like) 139 450 IPR011009 -
Adu02g00596 471 MobiDBLite consensus disorder prediction 1 82 - -
Adu02g00596 471 CDD STKc_GSK3 135 427 IPR039192 -
Adu02g00596 471 ProSiteProfiles Protein kinase domain profile. 140 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g00596 471 PANTHER SHAGGY-LIKE KINASE 6 469 - -
Adu02g00596 471 Gene3D Transferase(Phosphotransferase) domain 1 220 468 - -
Adu02g00596 471 SMART serkin_6 140 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g00596 471 ProSitePatterns Serine/Threonine protein kinases active-site signature. 261 273 IPR008271 GO:0004672|GO:0006468
Adu02g00596 471 Pfam Protein kinase domain 140 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g00596 471 ProSitePatterns Protein kinases ATP-binding region signature. 146 170 IPR017441 GO:0005524
Adu02g00596 471 MobiDBLite consensus disorder prediction 9 25 - -
Adu02g00596 471 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 6 469 - -
Adu02g00596 471 Gene3D Phosphorylase Kinase; domain 1 125 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00596 Adu-Chr2 7833963 7838809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00596 146 427 Core Cell Cycle Gene Families AT1G76540 37.586 9.15e-59 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Adu02g00596 Pkinase 2.6e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00596 K00924 - gmx:100811346 839.336