Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00580 ATGGCACAGCCTGCAGAAATATCATcatcttccttcaccggtgagtggacttatgatgttttcctcagttttagagggcaagatacccgccacaattttactggtaacctctaccattctttggatcaaaagggaatacacaccttcatcgatgatgaaagccttagaaagggagaagaaattaagccatcccttctcaaagcaattcaagaatctaggaccgccatagttgttttctcagaaaactatgcgtcctcaacttattgtttggatgaacttgtcgcaattcttgagcatttgaaagcagaaggtcgacttgtttggcctattttttatgatgtggatccatccgttgttcgacatcagagaggtagttatgcagaggctttagcaaaacatgaagaaaggtaccaagatgacaagggcaaggtgcaaaagtggaggaatgctttgcttgaagcagctaatttgtctggttcgcatttcaTACAGGGGTCTGAATCAGAATATAAGTTTATTAAAGAAATCATTAGCACTGTCTCCAAAAAGCTCAATCACACTCCTTTACATGTTGCTGACAACCCAGTTGGGCTAGGATCACCGGTGCTTCAAGTGAAATCTATTATGGAAATTGGCTCTAATGAGAGAGTTAAGATGATCGGAATTTGTGGGACCGGTGGAATAGGTAAAACAACAATTGCACGAGCTGTGTATAACCTGCTCGCTGACCAATTTGATGGTTTGTGTTTTCTTGCGGACATCAGAGAAAAGGCGATTGATAAGCATGGCCTTGTACAACTGCAGGAAACACTACTTTCTGAAATACTTGGAGAGAAAGATATTAAGATTGGATGTGTCAATAAAGGGATTCCACTAATAAAAAGGAGGCTCCAAAGAAAGaaggtcctattggtacttgatgatgtggacaatcttaaacagttaaaggcaattgctggaggaaatgattggtttggctttggtagtcgaatcattatcacatctagagacaagcatctgttaagtgctcatggggtgagtgagttttatgaggttaaagagttaagtaaaagagatgcacttgaattgttcagttggaatgccttcaaaagcaacaaagttaatccaggttatgcaaatatttcaagccgtgtcctgttgtatgccggtggtcttcctttagctctgcaagtaattggttccaacttgtataatagaggcattgacgaatggaagtctgcattagataaatatgaaagaattcctaatacagaggttaatgaaatacttaaggtaagttatgatggtctggaggaagatgagaagaatattttccttgacattgcttgtttcttcaacaaatacaaaatgtcctatgtcagaggaatgctacatgcacatggtttccacccagaacatggcattcgagttttggttgacaaatctcttgtgagtattgatagaaatgattgtctgagaatgcatggcttgattcaggacatgggtagagaaattgttagacaggaatctacttctgagcctggcaaacgtagtagattgtggtttgatgaggatatTTTTTATGTTTTGCAAAATGATACGGGAACCGATAAAGTCGAAGTCATAATTTTGAACTCAAGCAGACAGAAAAAGGGTCCCAAACATCTCCCAGATAGTTTACGTGTTTTGGATTGGGTCGGATATCCATCAACATCTTTACCATCTGGTTTTAATCCTACCGAGCTCTCCATACTCAGCATGATTAGTAGCTGCCTTAAATTCGACAAACCACTCAAGGTGTTTTGTTCTTTGAGTTTTATGAATTTTGAAGATTGTAAATTGTTAAGACAAGTACCCGGCCTTTTTGGACTCCCAAACTTACGGGCATTGTGTCTTGATAATTGCACCAATTTAGTTGAAGTTCATTATTCTGTTGGATTTCTTAAGAAACTAATTTTGTTGAGTGCTCAAGGATGCTCCAAGCTCCAAAGTTTTGTAAGTGCCATTAATTTGCCATCTCTTGAGACTCTAGACCTAAGGTGGTGCACAAGTCTTGAGAGTTTTCCAGAAGTACTAGGACAAATGGAAAACCTCAAAGAGGTTTATTTGGACCACACTGCCATAAAAGAATTGCCATTTTCAATCCACCGTCTGATTGGGCTTGAATGGCTGTCCCTGAGGAGATGCAAAAATCTCAACCAACTTCCAGTCAGCATTAGTTTATTACCCAAACTTGAGGTGTTGATTGATTACAAGGGTAGAGGATATCGATTGTATGAACCAGACAAAGCTGAAGAAGCCGTGATGTCAAAAGTGTTCGTATCTCCCTCTTTAGTGGATAAGGGATCTTTGCTTCCCTTTGCCAAAGCATATTGTATAACGATGATTGACTACAATGTTATCCAAGAATATCCACCCGGCATTGTTTTGCCTGAAAGACACGTCCATTTTGGGAGTGGATCATCTGTTTCGTTTTGGTTTCGTGAAAGATTTCCAAAGGTCACAATCTTGCTTATTGCAGAACCTTCTTTATACATTGACATCATGCATAGTTCAGTGTGTGAGTTCAGATACTCGGTGGTCATCAATGGAATCAACCAATTCAGTTCTTCATGTGACTACATCATTTCTGAGGCGCAGAAATTGTGTCTGACTATTTTTCTGGGTGACCTTCAACGCCTGATTGAGGAGGGTGCTGTCAAAAGAGTGTTTTCCGTTTCCAAGGATGAAGAGAATCACGTTGAGGTTTCATTCGAGCTAAAATATCACATGCCATATGATCCTAAGCATGTAAGTGAAGGCCAAAACAGAAGCATAGAAGGAACAATAAAGCAAAGCACCGTTCATGGGGACATGCATGATATCCTATTATATCTATCTCCCTACTGCAAGAATAGTTTCCGCTGCTACTACCAAAGCAAAGCACTTCAAAAACACATGAGAAGAAAAGAAAAGCAGGCACAACATATAAGGTTGTTTCCGAATATTGTAATAAACAGGAAAAATTGA 3009 0.2463 MAQPAEISSSSFTGEWTYDVFLSFRGQDTRHNFTGNLYHSLDQKGIHTFIDDESLRKGEEIKPSLLKAIQESRTAIVVFSENYASSTYCLDELVAILEHLKAEGRLVWPIFYDVDPSVVRHQRGSYAEALAKHEERYQDDKGKVQKWRNALLEAANLSGSHFIQGSESEYKFIKEIISTVSKKLNHTPLHVADNPVGLGSPVLQVKSIMEIGSNERVKMIGICGTGGIGKTTIARAVYNLLADQFDGLCFLADIREKAIDKHGLVQLQETLLSEILGEKDIKIGCVNKGIPLIKRRLQRKKVLLVLDDVDNLKQLKAIAGGNDWFGFGSRIIITSRDKHLLSAHGVSEFYEVKELSKRDALELFSWNAFKSNKVNPGYANISSRVLLYAGGLPLALQVIGSNLYNRGIDEWKSALDKYERIPNTEVNEILKVSYDGLEEDEKNIFLDIACFFNKYKMSYVRGMLHAHGFHPEHGIRVLVDKSLVSIDRNDCLRMHGLIQDMGREIVRQESTSEPGKRSRLWFDEDIFYVLQNDTGTDKVEVIILNSSRQKKGPKHLPDSLRVLDWVGYPSTSLPSGFNPTELSILSMISSCLKFDKPLKVFCSLSFMNFEDCKLLRQVPGLFGLPNLRALCLDNCTNLVEVHYSVGFLKKLILLSAQGCSKLQSFVSAINLPSLETLDLRWCTSLESFPEVLGQMENLKEVYLDHTAIKELPFSIHRLIGLEWLSLRRCKNLNQLPVSISLLPKLEVLIDYKGRGYRLYEPDKAEEAVMSKVFVSPSLVDKGSLLPFAKAYCITMIDYNVIQEYPPGIVLPERHVHFGSGSSVSFWFRERFPKVTILLIAEPSLYIDIMHSSVCEFRYSVVINGINQFSSSCDYIISEAQKLCLTIFLGDLQRLIEEGAVKRVFSVSKDEENHVEVSFELKYHMPYDPKHVSEGQNRSIEGTIKQSTVHGDMHDILLYLSPYCKNSFRCYYQSKALQKHMRRKEKQAQHIRLFPNIVINRKN 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00580 1002 Gene3D - 14 182 IPR035897 -
Adu02g00580 1002 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 448 IPR027417 -
Adu02g00580 1002 SUPERFAMILY "Winged helix" DNA-binding domain 425 530 IPR036390 -
Adu02g00580 1002 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 547 691 - -
Adu02g00580 1002 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 12 537 - -
Adu02g00580 1002 Coils Coil 130 150 - -
Adu02g00580 1002 SMART AAA_5 216 355 IPR003593 -
Adu02g00580 1002 SUPERFAMILY L domain-like 537 749 - -
Adu02g00580 1002 Pfam NB-ARC domain 215 432 IPR002182 GO:0043531
Adu02g00580 1002 Gene3D - 183 347 IPR027417 -
Adu02g00580 1002 Pfam TIR domain 18 189 IPR000157 GO:0007165
Adu02g00580 1002 SMART till_3 17 157 IPR000157 GO:0007165
Adu02g00580 1002 Gene3D - 354 438 IPR042197 -
Adu02g00580 1002 ProSiteProfiles TIR domain profile. 16 184 IPR000157 GO:0007165
Adu02g00580 1002 Gene3D Ribonuclease Inhibitor 537 668 IPR032675 -
Adu02g00580 1002 Gene3D Ribonuclease Inhibitor 669 752 IPR032675 -
Adu02g00580 1002 PRINTS Disease resistance protein signature 296 310 - -
Adu02g00580 1002 PRINTS Disease resistance protein signature 669 685 - -
Adu02g00580 1002 PRINTS Disease resistance protein signature 219 234 - -
Adu02g00580 1002 PRINTS Disease resistance protein signature 389 403 - -
Adu02g00580 1002 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 159 IPR035897 -
Adu02g00580 1002 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 547 691 IPR044974 GO:0006952
Adu02g00580 1002 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 537 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00580 Adu-Chr2 7620488 7623864 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00580 12 748 WRKY Transcription Factor Family AT4G12020 33.589 4.02e-97 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00580 - - ahf:112802989 1046.96