Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00579 ATGGAAGCAGCTACAGCAGCTACTACTTCCTCTCAGTCTTGCCAGAGAAAGCTGAAGAGAAAGCGCGCCGCCGCGTTGGTGAGTGACCCCCAACTCGACCGACTTAACTCGCTGCCTTGGAACCCTTCGTTTCCACGAAACAATGACGAAGATGATAACAACAACGAAAACGATCCCTTTGCTATGCTCGCTACTGGCTCCAACGAGCTCGAAGGAGGTTTCCTCTCGCTCGAGGAGATCGACGAGGCTGATTACGGTTTTTCCATTCCTGAACCTCAAATTAACGAGAAGAAGAACCAGAAGAAGAAGCATAAACTCGACGAGAATGTGATAGAAGAGAAGAAGAAGAAGGAAGAAGAAGAAGAAGATGATGGAGTTGGCGGTGGCGGCGGCGGTGGTAGCGGTGAGGTTGAAGTGAAGAAGGAAAAGAAAAAAGACAAGAAGAAGAAGAAGAAGAAGAAAAAGAAGACAAAGAAGGATAAGAAGAAGGAGGAGGAAGAAAAGAAGGATAAGAAGAAGGAGGAGGAGGAAAAGGAGGAGAAAGCGGTTACCGAAAACCAGAATGTTGAGAAGCCAGATACTGGTAGTCTAGATACTGATGTGAAGGATGATGATGATGTTGGGGAAGACTTTGATGAAACTGAATTTTATGCATGGAATGAGTTGAGGTCAAGGGAAGGTTGTTTGAAGTTTTCCTTCTTCAGTGGTTTTGCTGGATCTGGTAAAACACTTGCATTTGGTTTGCCCATTTTGCAACGTATTTTGGAGGAACGGGAGAAGGCTACAAAGATTGAGGAAGAAAGGGGTAAAGAGCCAGAAAAATATGCTCCTACAGGAATTTTGAGGGCTCTAATTGTTGCCCCAACCAGAGAGCTTGCTATTCAGGTAACTGATCATCTGAAAGCAGTAGCTAAGTATATTAATGTTAGGGTGACCCCTATTGTTGGGGGAATTTTAGCCGAAAAGCAGGAGAGACTTTTAAAATCAAGACCTGAGATTGTTGTTGGAACTCCAGGGAGGTTGTGGGAACTTATGTCAAGTGGAGAAAAGCATCTAGTTGAGTTACATTCATTGTCTTTCTTTGTGCTTGATGAGGCTGATCGAATGGTACAAAACGGTCATTTTAAGGAGTTGCAATCAATAATTGACATGCTTCCCATGTCAAATATCTCCGCCGAAGATAATTCTCAACATGCACAAAATTGTGTTACAGTTTCAAGCTACCAAAGAAAGAAAAGACAAACTCTTGTGTTTTCAGCTACTGTTGCACTTTCTGCTGATTTTCGCAAGAAGCTTAAGTGCGGTTTAGTAAAACAAAAACAATCATTCACAGAGGAACTGAATTCTATTGAAACTCTTTCTGAACGAGCTGGAATGAGATCCAATGCTGCAATTATTGATCTTACCAACCCGTCAATATTGGCAGCCAAGCTTGAGGAATCATTTATTGAATGCAGGGAAGAAGATAAAGATGCCTACTTGTATTATATTTTGACTGTCCATGGACAAGGTCGCACCATAGTTTTCTGTACATCAATTGCAGCTTTGCGCCATATTTCTTCCATACTGCGGATTCTTGGCATTGATGTTTGGACTCTGCATGCACAAATGCAGCAGCGAGCACGTTTAAAGGCCATGGATCGTTTTCGTGAAAGTGAAAATGGCATACTAGTTGCTACGGATGTTGCTGCAAGGGGTCTTGATATTCCTGGTGTTAGAACTGTTGTCCACTATCAGCTTCCGCATTCAGCAGAGGTTTATGTGCATAGAAGTGGAAGAACAGCTAGAGCTTCTGCTGAAGGTTGTAGCATTGCTTTAGTCTCACCAAAAGAAACGGCAAAGTTTGCTTCGCTGCTCAAATCATTTTCTAAGGACAATTTTCAGCGGTTTCCTTTACAGAACTCATACATGCCAGAGGTTTTAAAACGATTGTCTCTTGCACGCCAAATTGACAAAATAACACGAAAGAATTCGCAGGTGAAAGCTGAGAAAAACTGGTTTGATCGAAATGCTAACTCAGTTGAATTAGTTACTGAAAATGACGACAGTGAGGAGGAACAAGTGAACAAACACAAGCAAATGAAAGCCAGTTCTAAACAGTTGAAGACATTGCAACAGGAGCTCAAAATGTTGATTTCACGTCCTTTACAATCAAAGACATTTTCACATCGATATTTAGCAGGGGCTGGTGTCACACCTGTCATGCAGGAACAATTGCTACAATTAGCAAAGCAAAAACTAAATGATCGCCCGGGCTCAGGAGTAGGCAAGAAGGGAAAATTGGTTGTGATTGGTCAAGATTGTGTTGAAGCACTTCAGGCACTCCGGAATGCTGGTGAAGAGGTGCGCATGGATGTCAAGGATTTTGCTGGAAAACAGAGAAATATAGAAAATCGGAAAAGAAAAAGAAAAGAGGAGAAGAAACGTTTGCGTGATCAGCGAAGAAAGCAGAAGAAAAAGCTAAAACAGGACAATCAATAG 2481 0.422 MEAATAATTSSQSCQRKLKRKRAAALVSDPQLDRLNSLPWNPSFPRNNDEDDNNNENDPFAMLATGSNELEGGFLSLEEIDEADYGFSIPEPQINEKKNQKKKHKLDENVIEEKKKKEEEEEDDGVGGGGGGGSGEVEVKKEKKKDKKKKKKKKKKTKKDKKKEEEEKKDKKKEEEEKEEKAVTENQNVEKPDTGSLDTDVKDDDDVGEDFDETEFYAWNELRSREGCLKFSFFSGFAGSGKTLAFGLPILQRILEEREKATKIEEERGKEPEKYAPTGILRALIVAPTRELAIQVTDHLKAVAKYINVRVTPIVGGILAEKQERLLKSRPEIVVGTPGRLWELMSSGEKHLVELHSLSFFVLDEADRMVQNGHFKELQSIIDMLPMSNISAEDNSQHAQNCVTVSSYQRKKRQTLVFSATVALSADFRKKLKCGLVKQKQSFTEELNSIETLSERAGMRSNAAIIDLTNPSILAAKLEESFIECREEDKDAYLYYILTVHGQGRTIVFCTSIAALRHISSILRILGIDVWTLHAQMQQRARLKAMDRFRESENGILVATDVAARGLDIPGVRTVVHYQLPHSAEVYVHRSGRTARASAEGCSIALVSPKETAKFASLLKSFSKDNFQRFPLQNSYMPEVLKRLSLARQIDKITRKNSQVKAEKNWFDRNANSVELVTENDDSEEEQVNKHKQMKASSKQLKTLQQELKMLISRPLQSKTFSHRYLAGAGVTPVMQEQLLQLAKQKLNDRPGSGVGKKGKLVVIGQDCVEALQALRNAGEEVRMDVKDFAGKQRNIENRKRKRKEEKKRLRDQRRKQKKKLKQDNQ 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00579 826 MobiDBLite consensus disorder prediction 1 67 - -
Adu02g00579 826 SMART ultradead3 207 450 IPR014001 -
Adu02g00579 826 Pfam Helicase conserved C-terminal domain 489 597 IPR001650 -
Adu02g00579 826 Pfam DEAD/DEAH box helicase 238 423 IPR011545 GO:0003676|GO:0005524
Adu02g00579 826 PANTHER RNA HELICASE 104 747 - -
Adu02g00579 826 SMART helicmild6 517 598 IPR001650 -
Adu02g00579 826 MobiDBLite consensus disorder prediction 160 187 - -
Adu02g00579 826 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 362 370 IPR000629 -
Adu02g00579 826 Gene3D - 234 438 IPR027417 -
Adu02g00579 826 MobiDBLite consensus disorder prediction 796 818 - -
Adu02g00579 826 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 282 613 IPR027417 -
Adu02g00579 826 Gene3D - 475 713 IPR027417 -
Adu02g00579 826 PANTHER ATP-DEPENDENT RNA HELICASE DDX24 104 747 - -
Adu02g00579 826 MobiDBLite consensus disorder prediction 85 207 - -
Adu02g00579 826 CDD SF2_C_DEAD 478 607 - -
Adu02g00579 826 MobiDBLite consensus disorder prediction 34 48 - -
Adu02g00579 826 Coils Coil 101 123 - -
Adu02g00579 826 Coils Coil 140 188 - -
Adu02g00579 826 Coils Coil 793 826 - -
Adu02g00579 826 MobiDBLite consensus disorder prediction 792 826 - -
Adu02g00579 826 MobiDBLite consensus disorder prediction 95 123 - -
Adu02g00579 826 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 477 638 IPR001650 -
Adu02g00579 826 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 386 IPR027417 -
Adu02g00579 826 MobiDBLite consensus disorder prediction 144 159 - -
Adu02g00579 826 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 239 440 IPR014001 -
Adu02g00579 826 Coils Coil 694 714 - -
Adu02g00579 826 CDD DEADc_DDX24 239 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00579 Adu-Chr2 7611103 7617364 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00579 238 638 Eukaryotic Initiation Factors Gene Family AT5G11170 26.781 1.13e-29 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00579 K14805 - gmx:100806018 969.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g00579 02 7611103 7617364 Adu02g00579 02 7611103 7617364 ECH