Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00561 ATGGCTTCTCTACTCCCTCCAACTCCAACTGCCACTGCCACAGTCCAACAGCATTATTGTTATTATTATAATTTGCATAACAGCCAAATAGTGGCAATCTGCTGCTTCTCACCTGCTCACAAAAAACTACTCCCCATCACTTCAAAGAGGAAGAGTAGGAGGGGCCTCATCAGGTGCAATGCTTTCTTTGATGACGTGGCAACCGGTTTGTTGGAGCTGGAGAATGCTCCTTACTTTCAGGGCTTATCGGAGACGCAGCGGTGGTGGATAGTGGCTTTTGGCGGCCTTGTTTGGATTTATTTCACTGCAAGGCCCGGGGTTCTCATCGGCGCCATCGATGCATACCTTCTTGCCCCTCTTCAGCTAGCGCTGGACAGTTTTTCCGGAAGGAGGAACCTCAAGAGGACTGATTTTCTCGTCGGAGAAAAGCTCGGCGAGGGCTCCTTCGGTATTGTGTACTCTGGTGTACTCCTCCCGAAGAATCTCAATGACTCGCCGGCGGACCAGAAGAGGCCACGACGGCCTCCGCCTCGGTCTGCTCTTGTTCCCCAATCTCAATCTAAGGACAAAGTCATTCTTAAAAAGGTGAAGGTTGAGATCAAAGGGGCCCGAGAATTCGGTGATTTTGAGGAGTGGTTTAACTACAGGCTCGCTAGAGCAGCACCCGAAACATGTGCCGAATTCCTTGGAAGTTTTGTAGCTGATAAGACAAATTCACAGTTCACAAAAGGTGGAAAATGGCTTGTTTGGAAGTTTGAGGGAGATCTCACTCTTGGTGATTACATGAAAGATCGCAACTTCCCCTCAAACTTAGAATCCCTCATGTTTGGACGAGTCTTGCGAGGCGCAGACTCTTCTAAGAGAAATGCCTTGATCATCAAGCAAGTAATGCGCCAGATTATTACCTCTCTTAAGAAAATTCACGACACGGGAATTGTTCACAGGGATATAAAGCCAGACAACTTGGTAGTTACTAAGCGTGGTCGGATTAAACTCATTGATTTTGGTGCCGCAACTGACCTACGGATTGGAAAGAATTATGTTCCCAACAAGACACTACTGGATCCTTACTACTGTCCCCCGGAATTATATGTACTTCCAGAAGAAACGCCGAGTCCTCCACCAGAGCCAATTGCAGCTCTCCTTTCGCCAATCTTGTGGCAGTTAAACAGTCCTGATCTGTTTGATATGTATTCGGCTGGGATTGTGCTTCTGCAAATGGCAATACCATCGTTGAGGTCTGCTGCTGCTTTGAGGAATTTCAATCTGGAAATAAAAAGCTGCGGATATGATTTGAAAAAATGGAGAGACTATACTCGCCTCAGGCCTGATTTTCAAATTCTGGATAGTGAATCTGGTAGAGGGTGGGACTTAGCTACAAAGCTTATATCGGAGAGAGGCAGCTGCAGTCCTCTCGAAATTAAGCTTAGACAGAAAGTGATCCGCCTAGCAAAGAGAAGCACATTTGAAGACCACCCGACTTATGAGTTGACAACCATCAGTTATAAGATTTTGGGAAGACTTTATACACAGTTTCAGCCACAGAGAGGTGATTGGTCTGAGAATGCCAGGACCTTGCCTGTGGTACCATATATAATATTACATCTTGAAACAAGATATAGAGATAAGTGA 1632 0.4608 MASLLPPTPTATATVQQHYCYYYNLHNSQIVAICCFSPAHKKLLPITSKRKSRRGLIRCNAFFDDVATGLLELENAPYFQGLSETQRWWIVAFGGLVWIYFTARPGVLIGAIDAYLLAPLQLALDSFSGRRNLKRTDFLVGEKLGEGSFGIVYSGVLLPKNLNDSPADQKRPRRPPPRSALVPQSQSKDKVILKKVKVEIKGAREFGDFEEWFNYRLARAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDLTLGDYMKDRNFPSNLESLMFGRVLRGADSSKRNALIIKQVMRQIITSLKKIHDTGIVHRDIKPDNLVVTKRGRIKLIDFGAATDLRIGKNYVPNKTLLDPYYCPPELYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPSLRSAAALRNFNLEIKSCGYDLKKWRDYTRLRPDFQILDSESGRGWDLATKLISERGSCSPLEIKLRQKVIRLAKRSTFEDHPTYELTTISYKILGRLYTQFQPQRGDWSENARTLPVVPYIILHLETRYRDK 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00561 543 Pfam Protein kinase domain 292 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g00561 543 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 1 468 IPR044803 GO:0004674|GO:0009579
Adu02g00561 543 MobiDBLite consensus disorder prediction 163 186 - -
Adu02g00561 543 Gene3D Transferase(Phosphotransferase) domain 1 281 491 - -
Adu02g00561 543 ProSiteProfiles Protein kinase domain profile. 138 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g00561 543 Gene3D Phosphorylase Kinase; domain 1 126 252 - -
Adu02g00561 543 SMART serkin_6 138 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g00561 543 ProSitePatterns Serine/Threonine protein kinases active-site signature. 312 324 IPR008271 GO:0004672|GO:0006468
Adu02g00561 543 SUPERFAMILY Protein kinase-like (PK-like) 135 409 IPR011009 -
Adu02g00561 543 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC 1 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00561 Adu-Chr2 7375943 7378688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00561 299 400 AGC Kinase Gene Family AT5G04510 33.333 7.05e-09 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Adu02g00561 Pkinase 6.1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00561 - - gmx:100788727 650.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g02131 04 102509098 102512472 Adu02g00561 02 7375943 7378688 PCT