Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00550 ATGCTTTCCCTTGACCCGTTACCCCACCACGCCCACTGCGGGCCCGGCCATGGGCTCATGCTGGTGCCGAAATCTGAGGATGTCGGTCGGCCCATGGACTTCGTGGGCTCTCGAATTGGGCTGAACCTGGGAGGGCGCACCTACTTCTCGTCCTCGGAGGATGACTTCGCGAAGCACTACCACCGCCGCCACAAAGTGTGCGAGTTCCACTCTAAGGCCTCCACCGTCATCGCCGCCGGGTTGACTCAGCGATTCTGCCAACAATGCAGCAGGTTGTTCCATCTTCTCTCTGAGTTCGATAACGGAAAACGTAGCTGCAGGAAGAGACTGGCAGATCATAATCGTCGCAGAAGAAAAACTCAGCAGCCACCAGCACAAGACATCCACAAATCTCAGCCTGCTACTAATTTGGATAACGTTGCAAGGTCCCCACCGGAGTCCGGAGCTCAGTCATCTTCGTCCGTAACGGTGGCCGTGTCGCCACCTGATTACTTCCGGCAAAGGCCGTACCAAACCGGAAGCCCATCAACGACTTCAAGTTCACTGTTTTTCTCAAGCGGGCAGTAG 567 0.5626 MLSLDPLPHHAHCGPGHGLMLVPKSEDVGRPMDFVGSRIGLNLGGRTYFSSSEDDFAKHYHRRHKVCEFHSKASTVIAAGLTQRFCQQCSRLFHLLSEFDNGKRSCRKRLADHNRRRRKTQQPPAQDIHKSQPATNLDNVARSPPESGAQSSSSVTVAVSPPDYFRQRPYQTGSPSTTSSSLFFSSGQ 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00550 188 MobiDBLite consensus disorder prediction 125 160 - -
Adu02g00550 188 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 57 172 IPR044817 GO:0003677
Adu02g00550 188 Gene3D - 50 107 IPR036893 GO:0003677|GO:0005634
Adu02g00550 188 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 8 57 172 - -
Adu02g00550 188 Pfam SBP domain 57 119 IPR004333 GO:0003677
Adu02g00550 188 ProSiteProfiles Zinc finger SBP-type profile. 22 120 IPR004333 GO:0003677
Adu02g00550 188 MobiDBLite consensus disorder prediction 109 188 - -
Adu02g00550 188 SUPERFAMILY SBT domain 57 122 IPR036893 GO:0003677|GO:0005634
Adu02g00550 188 MobiDBLite consensus disorder prediction 167 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00550 Adu-Chr2 7146773 7148453 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00550 57 162 SBP-box Gene Family AT1G20980 51.724 5.56e-29 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Adu02g00550 SBP 2.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00550 - - adu:107473166 271.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g00550 02 7146773 7148453 Adu02g00550 02 7146773 7148453 ECH