Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00537 ATGCATGGGAATAAGAGAAAGAAAGAGAGAGGGGATGAATTAGTAGATTACATAAGGAAAGGGCCATGGAAGAAAGAGGAAGATGAAGTGCTACTCAACCATGTAAGCAAGTATGGCCCCAGAGACTGGAGCTCCATTCGATCCAAGGGTCTTCTTCATAGAACCGGCAAGTCTTGTCGCCTTCGTTGGGTCAACAAGCTTCGACCTAACCTCAAGAATGGGTGCAAGTTTACAGCGGAGGAAGAGAGGGTTGTGATAGAATTGCAGGCACAATTTGGGAACAAATGGGCTAAGATTGCGTCCTATTTGAGTGGAAGAACAGACAATGATGTCAAGAATTTCTGGAGCAGTAGGCAGAAGAGGCTTGCTAGGATTCTTCAGGCATCAACATCCACCTCCAAATCACACAGGAACAAACCTAAACTTCATCATCATCTTCCCACTTTCCAGGCTCCTAAATTGAGTTCTTCATCAGAGGGAGAATCATCATCAAAGCCTCATCAGCCATGCTTGTTCTCCTGCAATGACAATTCCGAGGTTATTAAAATGGTGGCATTACCAGATCTTATCAAGCCCAAGTTGCCTAATTCTGAGCAAGAAGAATCTGCACTTTTTGAGAGCAATAAAAGCAGTAGTATGATGGAACAAATTCCCTTCCCTCAAATTCCTGATGAACTCCAAACTGATCTAACACCATTCTCATTGGGAGACCAAGATTTCTTGACTAGAATTGATGATCCAAATTTTGCTGATTACTTTGGACCTCTCGGTGCATATGAGCTTGGGCTAGCCCCACAACACACCATTGGGTTCCCTTTCTTTGATCCATCAGAAGGAAGTTGCAGAATTGGGTCAACGGATATCATAGGTAGCTCCAAAAACTATGACAGCATATTTGATGATCTCCCAGTTAACATGTTTGATCATATGGATCCACCTTCAATTCCTTCCAAGCTCTGA 960 0.4323 MHGNKRKKERGDELVDYIRKGPWKKEEDEVLLNHVSKYGPRDWSSIRSKGLLHRTGKSCRLRWVNKLRPNLKNGCKFTAEEERVVIELQAQFGNKWAKIASYLSGRTDNDVKNFWSSRQKRLARILQASTSTSKSHRNKPKLHHHLPTFQAPKLSSSSEGESSSKPHQPCLFSCNDNSEVIKMVALPDLIKPKLPNSEQEESALFESNKSSSMMEQIPFPQIPDELQTDLTPFSLGDQDFLTRIDDPNFADYFGPLGAYELGLAPQHTIGFPFFDPSEGSCRIGSTDIIGSSKNYDSIFDDLPVNMFDHMDPPSIPSKL 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00537 319 ProSiteProfiles Myb-like domain profile. 76 119 IPR001005 -
Adu02g00537 319 SMART sant 19 69 IPR001005 -
Adu02g00537 319 SMART sant 73 121 IPR001005 -
Adu02g00537 319 ProSiteProfiles Myb-like domain profile. 15 67 IPR001005 -
Adu02g00537 319 MobiDBLite consensus disorder prediction 128 169 - -
Adu02g00537 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 71 IPR017930 -
Adu02g00537 319 SUPERFAMILY Homeodomain-like 18 115 IPR009057 -
Adu02g00537 319 PANTHER TRANSCRIPTION FACTOR DUO1 13 317 - -
Adu02g00537 319 CDD SANT 22 67 IPR001005 -
Adu02g00537 319 CDD SANT 76 115 IPR001005 -
Adu02g00537 319 Gene3D - 75 146 - -
Adu02g00537 319 MobiDBLite consensus disorder prediction 150 169 - -
Adu02g00537 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 123 IPR017930 -
Adu02g00537 319 Pfam Myb-like DNA-binding domain 76 115 IPR001005 -
Adu02g00537 319 Pfam Myb-like DNA-binding domain 23 73 - -
Adu02g00537 319 Gene3D - 20 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00537 Adu-Chr2 6882953 6884220 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00537 18 317 MYB Transcription Factor Family AT3G60460 48.875 4.78e-80 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu02g00537 Myb_DNA-bind_6 5.5e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00537 K09422 - gmx:100805384 395.971