Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00533 ATGGTGAAGCATCAACCTCGTAGCACCTTGGTTCTAAGTCTCTGGTGGTTCTTTGGTGTGTTAGCAATAGTAGTGATGGGTCAAAGAAACAGTAGTGGTGCAACAACACTTCCAACAAAAGTAGTGAAAGTGGGAGCGGTGCTTGATGTTGGTGGAGCAATGGTTGAAAAGATGGGTTTGAACAGCATCAGAATGTGTATCCATGATTTCTATGTGTCTCATCCACATTACAAAACTAGGCTCCAACTCATTCTAAGGGACTCCCAAAGAGACATTGTTACTGCTGCTGCTCAAGCTGTGGATCTTATAAAGAATGAGCAAGTGGTAGCTGTGATAGGACCAATCACAACAATGGAAGCCATGTTTGTGATCAACCTCGGAGATAAAGCGCACGTGCCCATTCTGACGTTCTCAGAAATGAGCCCTTCTCTCTCATCACTCCACACCCCATACTTGTTCCAAATTGCACAGAAAGATTATTATTTAACTCAAGTCGAGGCTATAAGCGCCATTGTTCAAGCTTTTGGGTGGAAACAAGTGGTTCCAATATACGTGGACAACGGTTATGGCGAAGGACTAATTGCATCCCTAACCAATTCATTTCAGAAAGCATACATTCGTGTTCCTTATCTCAGCGCCATTGATTTCTCAGCCACAAATGATGCCATTGAGAGAGAGCTCTACAAGCTCATGACTATGCAAACTAGAGTCTTTGTTGTTCACATGACATCCCGTCTTGCCTCTCGTCTCTTTGCCATTGCCAAAGACATTGGAATGATGGATGAAGGTTATGTTTGGATTGTGACTGCTGGAATTGCTAATCTTTTTAACTCATTGGACTCTTCGGTTATGGAATCCATGGAAGGTGTGTTGGGTGTTAGGCCTTATATTCCAAGAACAAAACAGCTTCTTGATTTTAGAGCTCGATGGAAAAGAGAGTTCTTAAGAGACAATCCAACACTTGTTGATGTTAATTTGGATGTTTTTGGAATATGGGCCTATGATGCTACTGCTGCATTAGCCATGGCAGTTGAGAAGCTTGACAACACTGTTTTCGGCTTCACTAATGTCAGCAACGACTCCAGCAACGTGACTGATCTTGAAAACTTGGGCGTTTCGCGAAACGGCGAGAAGCTGAGGGAAGCTTTATCAAATGTTAGATTCAAAGGTGTTGGTGGTGAGTTCAAAGTAGTGGGTGGTGGGAAGTTAGAAGCATCACCATTTGAGATAGTTAATGTGATTGGTAATAGTGAAAGGAACATTGGATTTTGGACACCACAGAAGGGACTAATCAGAGACATGGATGCAGATAATTTAACTTCTAAGGAGAATCTAAGAACAATTCTATGGCCAGGGGACTCTTACTCTGTTCCAAAGGGATGGGAAATTCCCACAAATGGTAACAAGTTAAAGATAGGAGTCCCAGTGAAAGATAATGGCTTCTCTGAATTTGTGAAAGTAATCCATGATCCTATTACCAATTCCACAAAGGTCACCGGGTTCTGCATTGATGTGTTTAATGCTGTGGTAGAAGCGTTGCCTTATGCCCTTCCATTTGAATTCATTCCATTTGAAAATTCCAACAATGAGATGGCAGGAACATATGATGATTTGATCACCCAAGTTTATTATGAAAAGTTTGATGCTGTGGTGGGGGACACAACAATTACGGGAAACAGGTCCAAGTATGTCGATTTCACATTGCCGTACACAGAATCTGGTGTGACTATGGTTGTTCCAGTAAGAGACAATAGAAAGAAGAATGCATGGGCCTTCTTGAAGCCATTGACATGGGACCTTTGGGTAACAATATTTTTTACCTTTGTTTTCATAGGATTTGTTGCTTGGGTACTTGAACACCGAATCAATGAATGTTTTAGAGGGCCTACGCCTTATCAAATTGGCACTAGCTTGTGGTTTTCCTTCTCAACCATGGTATTTTCTCATCAAGAGAGAGTGGAGGGCAATTATGGAAGATTTGTGGTGATAGTATGGGTTTTTGTAGTTCAAATTCTGGTTCAAAGCTACACTGCAAGTCTTACCTCTCTCTTAACAGTTGAACGACTACGCCCAGCATTTACAGATGTTCATCAACTCTTAAAGAATCGGTTGAATGTTGGTTATTTGGAAGGTTCTTTTGTTCATGAAATCTTGAAGGATTTGGGGTTCCATGAAAACCAGCTTAAGATATATAAATCTGCAGAAGAATGCAATGATCTCTTCACAAAAGGAAGTGCTAATGGTGGTATCGATGCGGCGTTTGACGAAGTCCCTTACGTGATGCACCTTCTTGGAACTTATTGCTCCAAGTATGCCATGGTTGAGCCAAGATTTAAAACTGGTGGCTTTGGCTTTGTGTTTCCAAAAGGGTCACCTCTAGTGGGAGACATATCACGTGCAATCTTGGATGTGAGTGAAGGAGGCAAAATGAGAAGAATTGAGAATGCATGGTTGAATGGAAGCAGTTGTCAAGATTCAAATAACAATGCAGCACAAGTATCTTCTTCTACAAGCCTAGGACTAGAAAGCTTCTGGGGTCTGTTCTTGGTTGTAGGTATTTGTTGCTTATTAGCCCTCGTTATCTTTTTAGCCACATTCATATATCAGCATAGACATATTTTGTTAAGCCATAATCTCCCTGATGATAGTAGTTCTATAAGAACACGCATTGGAAAGTTGCTAAATACCTTCCATGAGAGAGATCTAAGCTCCCACACTTTCAAGAAAAGTGATTCAGGCGTAACAACAAGTGTGTCTTCTTGCCCTCCAATTAGTCCATCTAGTTACACAGGCTCAGGCTTTTCGGCCACTCCAAATACTCAACACAAACCTACACAAGAACCTCCTGTCATTACAACAAAAGGGATACAACCTCTTATTAAGCCACATAGATCCCTCTAG 2901 0.4143 MVKHQPRSTLVLSLWWFFGVLAIVVMGQRNSSGATTLPTKVVKVGAVLDVGGAMVEKMGLNSIRMCIHDFYVSHPHYKTRLQLILRDSQRDIVTAAAQAVDLIKNEQVVAVIGPITTMEAMFVINLGDKAHVPILTFSEMSPSLSSLHTPYLFQIAQKDYYLTQVEAISAIVQAFGWKQVVPIYVDNGYGEGLIASLTNSFQKAYIRVPYLSAIDFSATNDAIERELYKLMTMQTRVFVVHMTSRLASRLFAIAKDIGMMDEGYVWIVTAGIANLFNSLDSSVMESMEGVLGVRPYIPRTKQLLDFRARWKREFLRDNPTLVDVNLDVFGIWAYDATAALAMAVEKLDNTVFGFTNVSNDSSNVTDLENLGVSRNGEKLREALSNVRFKGVGGEFKVVGGGKLEASPFEIVNVIGNSERNIGFWTPQKGLIRDMDADNLTSKENLRTILWPGDSYSVPKGWEIPTNGNKLKIGVPVKDNGFSEFVKVIHDPITNSTKVTGFCIDVFNAVVEALPYALPFEFIPFENSNNEMAGTYDDLITQVYYEKFDAVVGDTTITGNRSKYVDFTLPYTESGVTMVVPVRDNRKKNAWAFLKPLTWDLWVTIFFTFVFIGFVAWVLEHRINECFRGPTPYQIGTSLWFSFSTMVFSHQERVEGNYGRFVVIVWVFVVQILVQSYTASLTSLLTVERLRPAFTDVHQLLKNRLNVGYLEGSFVHEILKDLGFHENQLKIYKSAEECNDLFTKGSANGGIDAAFDEVPYVMHLLGTYCSKYAMVEPRFKTGGFGFVFPKGSPLVGDISRAILDVSEGGKMRRIENAWLNGSSCQDSNNNAAQVSSSTSLGLESFWGLFLVVGICCLLALVIFLATFIYQHRHILLSHNLPDDSSSIRTRIGKLLNTFHERDLSSHTFKKSDSGVTTSVSSCPPISPSSYTGSGFSATPNTQHKPTQEPPVITTKGIQPLIKPHRSL 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00533 966 CDD PBP1_GABAb_receptor_plant 43 430 IPR044440 -
Adu02g00533 966 PIRSF IGluLR_plant 7 949 IPR017103 -
Adu02g00533 966 Gene3D - 162 325 - -
Adu02g00533 966 Pfam Bacterial extracellular solute-binding proteins, family 3 495 819 IPR001638 -
Adu02g00533 966 MobiDBLite consensus disorder prediction 929 952 - -
Adu02g00533 966 CDD GluR_Plant 468 818 - -
Adu02g00533 966 Pfam Receptor family ligand binding region 63 415 IPR001828 -
Adu02g00533 966 Gene3D - 589 727 - -
Adu02g00533 966 Gene3D - 373 469 - -
Adu02g00533 966 MobiDBLite consensus disorder prediction 929 966 - -
Adu02g00533 966 Gene3D - 728 825 - -
Adu02g00533 966 Gene3D - 470 588 - -
Adu02g00533 966 PANTHER GLUTAMATE RECEPTOR 2.9 42 923 - -
Adu02g00533 966 Pfam Ligand-gated ion channel 820 854 IPR001320 GO:0015276|GO:0016020
Adu02g00533 966 SUPERFAMILY Periplasmic binding protein-like I 40 462 IPR028082 -
Adu02g00533 966 SUPERFAMILY Periplasmic binding protein-like II 447 820 - -
Adu02g00533 966 SMART GluR_14 469 820 IPR001320 GO:0015276|GO:0016020
Adu02g00533 966 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 42 923 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00533 Adu-Chr2 6843490 6848413 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00533 42 946 Ion Channels AT2G29110 50.108 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00533 K05387 - pvy:116134990 1006.13