Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00511 ATGGAGCCAAGTGGACAGGTTGAGAAATCTGCTAAGAGAAAGAGGAAGAACCAGTTTCGGGGAATCCGTCAGCGTCCATGGGGGAAATGGGCGGCTGAGATCCGCGACCCGAGAAAGGGTGTTCGTGTCTGGCTTGGGACATTCAGCACTGCTGAAGAAGCCGCAAGGGCTTATGATGCTGAAGCAAGGAGGATCCGTGGCAAGAAAGCCAAGGTGAACTTCCCCGAGGAGGTTCCGGCCGCGTCCTCAAAGAGGTTCAAGCCACATCCCGAAATGCAGCTCCCTAAGGAGAAAATGAACTGTGCTAAGCCCAAACTGAACAACCAGATGTTTGACTTTGGTAACGAACTCGGGGACTTCTACTCTCAGTTGGATCAGGTGGAACAGAAGCCTCTGATTAACCAATATGCTAACATGGAGTCATTCCCCGGAAATGGACTTTTAAATGCATCTGATGATGTGGCTGCTTATTTCACTTCGGAACACTCGAGCAATTCATTTGAGTATTCCGACCTTTCATGGGGCGAGCAGGGCCCGAAGACTCCCGAGATATCATCCATGCTCTCGGCTCCCGTCGAAGTGCAGGGTGTGGCTAAGCAAGAGAAGAACATGGTGCAGCCTAACAACACTCAAGATGACTCTGCAAAGACACTATCCGAGGAGCTTGCAGATATGGAATCACAGCTGAAGTTCTTCGACACTCCTTACCTCGATGCAAGCTGGAACGATACTTCATTGGAATCCTTCCTTGGTGTGGACTCAACACAGGATGTTGGAAACCCAATGAACCTTTGGAGCTTCGATGACCTCCCTTCCGTGGGAGGCGGAGTCTTCTAA 837 0.5066 MEPSGQVEKSAKRKRKNQFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFSTAEEAARAYDAEARRIRGKKAKVNFPEEVPAASSKRFKPHPEMQLPKEKMNCAKPKLNNQMFDFGNELGDFYSQLDQVEQKPLINQYANMESFPGNGLLNASDDVAAYFTSEHSSNSFEYSDLSWGEQGPKTPEISSMLSAPVEVQGVAKQEKNMVQPNNTQDDSAKTLSEELADMESQLKFFDTPYLDASWNDTSLESFLGVDSTQDVGNPMNLWSFDDLPSVGGGVF 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00511 278 Coils Coil 208 228 - -
Adu02g00511 278 SMART rav1_2 18 81 IPR001471 GO:0003700|GO:0006355
Adu02g00511 278 CDD AP2 18 76 IPR001471 GO:0003700|GO:0006355
Adu02g00511 278 SUPERFAMILY DNA-binding domain 18 76 IPR016177 GO:0003677
Adu02g00511 278 MobiDBLite consensus disorder prediction 1 26 - -
Adu02g00511 278 PANTHER DNA-BINDING DOMAIN 4 272 IPR044808 GO:0003700|GO:0009873
Adu02g00511 278 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Adu02g00511 278 PRINTS Ethylene responsive element binding protein signature 41 57 IPR001471 GO:0003700|GO:0006355
Adu02g00511 278 Pfam AP2 domain 19 67 IPR001471 GO:0003700|GO:0006355
Adu02g00511 278 PANTHER EREBP TRANSCRIPTION FACTOR 4 272 - -
Adu02g00511 278 Gene3D AP2/ERF domain 17 77 IPR036955 GO:0003700|GO:0006355
Adu02g00511 278 ProSiteProfiles AP2/ERF domain profile. 18 75 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00511 Adu-Chr2 6511980 6514967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00511 1 270 AP2-EREBP Transcription Factor Family AT3G14230 44.898 4.86e-49 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu02g00511 AP2 4.9e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00511 K09286 - gmx:547957 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g00511 02 6511980 6514967 Adu02g00511 02 6511980 6514967 ECH