Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00507 ATGGAGGGAAGTTCTTCTTCTTCTTCTCAATTCTCAGAGTCTTTTTCTGATGTAGATGATTCACTACTCTTAGTTGATGATTTCTACTTCTCAGCTCTCTTTGATTCTGAAGAATTATTCCCAATCAATGATGAAAAATATGCAGAGGAACTACATTTACAAGAAGCTCTGTATTCTTCAGTTATAAGCCTCAAGAGAAAACTCAAAGAGGTTCATTCTGAATCTTCTACTCATCAAACTCATCATCATCGTCCTAGTTATCTTCATGATCATCAAGTATTCTTGTGTGCTATTTGCATGGATTCAAAACCATCCCAAGAGATTTTCATCAACCAAAACTGCAACCACTCATTCTGTGATGAATGCATTGCAAAATATGTAGCTGCAAAGATTCAAGAGAATATATCAAATGTGAAGTGTCCTGAACCAAAATGCAAAGGAATATTGGAGCCGCAGAATTGCATGTCAATAATTCCAAAGGAAGTGTTTGAAAGATGGGAGAATGCACTTTGTGAGAATCTTGTTCTTGCAACATCAAAGAAATTCTATTGCCCTTTCAAGGATTGTTCAGCAATGTTGGTGAATGATGATGGGAATGAAGTTGTGACTTGTTCCGAGTGTCCACATTGTCATAGATTGTTCTGTGCACGGTGTAGAGTTGCATGGCATGCTGGAATGGAATGTGGGGAGTTTATGAGTTTGAATGAAAATGAAAGAGAGAAGGAAGATCTTATGGTGATCAATCTTGCAAAGGCCAAGAGATGGAGAAGGTGTTCTAAATGCAGAATCTATGTTGAAAAGAATGAGGGATGTTCACACATTTCTTGCAGGTGTGGCCATCACTTTTGCTATGCTTGTGGAAAGCCATGGAATCAGTACCATGGTTATTCTTCCGATGAAAGAACACGATCTAGCACACCTCACGTCCAAGTTGAAATTACGAATAATAGCAATGGAGAGAACGAGAGGAAAGACAGTCCAGATTCACAATCACAAGCTTGGGGTCCCATTCCCAACAAGGTCCAGAAACCCAACCCCACCATGGACCAATCCTCTTCTGAAGCCACCATGAGAAAAGCCCGTGTTTCAGTGACACTTTATGTATTTTTGGAATTCATAAAAAAATCACTGGAGGAGTGA 1140 0.393 MEGSSSSSSQFSESFSDVDDSLLLVDDFYFSALFDSEELFPINDEKYAEELHLQEALYSSVISLKRKLKEVHSESSTHQTHHHRPSYLHDHQVFLCAICMDSKPSQEIFINQNCNHSFCDECIAKYVAAKIQENISNVKCPEPKCKGILEPQNCMSIIPKEVFERWENALCENLVLATSKKFYCPFKDCSAMLVNDDGNEVVTCSECPHCHRLFCARCRVAWHAGMECGEFMSLNENEREKEDLMVINLAKAKRWRRCSKCRIYVEKNEGCSHISCRCGHHFCYACGKPWNQYHGYSSDERTRSSTPHVQVEITNNSNGENERKDSPDSQSQAWGPIPNKVQKPNPTMDQSSSEATMRKARVSVTLYVFLEFIKKSLEE 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00507 379 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 25 295 IPR031127 GO:0004842|GO:0016567
Adu02g00507 379 ProSitePatterns Zinc finger RING-type signature. 114 123 IPR017907 -
Adu02g00507 379 MobiDBLite consensus disorder prediction 328 358 - -
Adu02g00507 379 Pfam IBR domain, a half RING-finger domain 164 228 IPR002867 -
Adu02g00507 379 Pfam IBR domain, a half RING-finger domain 249 292 IPR002867 -
Adu02g00507 379 ProSiteProfiles Zinc finger RING-type profile. 96 144 IPR001841 -
Adu02g00507 379 SUPERFAMILY RING/U-box 239 298 - -
Adu02g00507 379 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 90 179 IPR013083 -
Adu02g00507 379 Gene3D - 182 230 - -
Adu02g00507 379 Gene3D - 231 358 - -
Adu02g00507 379 ProSiteProfiles TRIAD supradomain profile. 92 305 IPR044066 -
Adu02g00507 379 MobiDBLite consensus disorder prediction 313 358 - -
Adu02g00507 379 SUPERFAMILY RING/U-box 90 173 - -
Adu02g00507 379 SMART ibrneu5 164 228 IPR002867 -
Adu02g00507 379 SMART ibrneu5 238 299 IPR002867 -
Adu02g00507 379 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 25 295 - -
Adu02g00507 379 SUPERFAMILY RING/U-box 164 231 - -
Adu02g00507 379 SMART ring_2 258 329 IPR001841 -
Adu02g00507 379 SMART ring_2 96 145 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00507 Adu-Chr2 6425713 6428516 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00507 96 295 C3H Transcription Factor Family AT2G31770 28.502 2.09e-20 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00507 K11975 - jre:109004923 356.681