Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00483 ATGTTGAATAATTCTGATGCAATTGTGATCTCTGGGAAGATCATGGTTGCAGTAGTGGTATTGCTGTCATTTGTGTTTGTTTTTGTCTTAATGCTCCATCTCTATTCCAAGTTTTCAATGTGGCGTGTTCAGCAAGAAACCTCCATTCCTTCACCACAAATCCGCCGTGGTCGCCGCCACCGGCGCCGTCGCCACCTTGTATTCGCCTCGGCCGAAGACGCTATCCTCCATGGAATTCAAAATGTTGGGCTTGACCCTTCAGTTCTTAAGTCCATACCTGTGTTGGTGTTCCAACCCCATGAATTCAAAGAGGATTTAGAATGTGCTGTTTGCATATCTGAGCTTGTTGAAGGTGAAAAGTTTAGAGCTTTGCCACATTGCAATCATGGGTTCCATGTTGATTGCATTGACATGTGGTTCCAATCACATTCTACTTGTCCCCTTTGTAGGACACTAGTTACTGAAAAACTCTCTAAGCTAAATAATAGCACTCCAAGTGTTCGAGAGAATGTCACAGAGAACAGTGAGTCATCATCAGAAGCTGAAAACTCTGCTGATGTGAATACCAATGATGAGTCTTCAAATTTTCCCACACATGTGTTGGTTTGGGGTGATCAAACACAATTTTCACACACTACTGAGGATCCACATTGCTCATCATCATCTGGTTCATGTTCTTCAAGCAGTGAGAGTGGAAGTGATAGTAGCACTAGTAGCAGCAGCAATGGAAGAAACAATAATGGAGTGTTGGTAATTGATATACCAAATGATGAGGTCACTCCTGAAGATGATGATGAGATGAAATCATCATCACCAATGGTAGCAAGATTGAGGTCAATCAAGAGGCTTCTAAGTAGGGACAAAAAGTCAACTAGTCCTTGTATTCCCAATTCTTTTGATGTGGAACAAGCATAG 915 0.4219 MLNNSDAIVISGKIMVAVVVLLSFVFVFVLMLHLYSKFSMWRVQQETSIPSPQIRRGRRHRRRRHLVFASAEDAILHGIQNVGLDPSVLKSIPVLVFQPHEFKEDLECAVCISELVEGEKFRALPHCNHGFHVDCIDMWFQSHSTCPLCRTLVTEKLSKLNNSTPSVRENVTENSESSSEAENSADVNTNDESSNFPTHVLVWGDQTQFSHTTEDPHCSSSSGSCSSSSESGSDSSTSSSSNGRNNNGVLVIDIPNDEVTPEDDDEMKSSSPMVARLRSIKRLLSRDKKSTSPCIPNSFDVEQA 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00483 304 PANTHER RING-H2 FINGER PROTEIN ATL3 2 299 - -
Adu02g00483 304 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 73 156 IPR013083 -
Adu02g00483 304 CDD RING-H2_EL5_like 107 150 - -
Adu02g00483 304 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 2 299 IPR044675 -
Adu02g00483 304 MobiDBLite consensus disorder prediction 211 249 - -
Adu02g00483 304 SMART ring_2 108 149 IPR001841 -
Adu02g00483 304 SUPERFAMILY RING/U-box 88 160 - -
Adu02g00483 304 MobiDBLite consensus disorder prediction 162 197 - -
Adu02g00483 304 MobiDBLite consensus disorder prediction 211 273 - -
Adu02g00483 304 Pfam Ring finger domain 107 150 IPR001841 -
Adu02g00483 304 ProSiteProfiles Zinc finger RING-type profile. 108 150 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00483 Adu-Chr2 6077495 6078409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00483 10 288 C3H Transcription Factor Family AT1G53820 39.527 5.63e-56 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00483 - - gmx:100775523 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g00483 02 6077495 6078409 Adu02g00483 02 6077495 6078409 ECH