Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00470 ATGGAGAAAGAAAGAAATGGTAGCAAATGCGGCAAAGAGCGATGGCATCAAGCAGTGGTGAAGCTCCGATGGTGCAACCAACTCTCTCCACAGGTGGAGTATCGGGCTTTCACCCCCAAAGAGGACGACACCATAATCAGAGCTCACACTCGGTTCGGAAACAAGTGGGCCACCATAGCCCGACTCATTTTCAACAGAACCGACAATGCCATTAAGAACCACTGGAACTCCACCCTCAAACGCAAGTGCGCCTCCATGGACCCCATCGACGATCCTCACTTCGCGCAGCCACCCAAACGCTCTGTTAGCACTGGTGCCGCCATACTCGTGTCAACGGTGGTGGTGAGGTACTCATTGCCAACGGTGATGGCGATGACGGAGATGGCGGGTAGGAAGGGGAGGATGCGGATGGAGAGCCAGGAGTGTGCAGTGGAGATGTCGGAGCAGATGTTGACGACGCGGGAGTTCTCGAGGGAGACAATGAAATCAATGGCGGTGTGTGGAGAAAGCTTGGAGGATTCAGGATTAGATTCATAG 537 0.54 MEKERNGSKCGKERWHQAVVKLRWCNQLSPQVEYRAFTPKEDDTIIRAHTRFGNKWATIARLIFNRTDNAIKNHWNSTLKRKCASMDPIDDPHFAQPPKRSVSTGAAILVSTVVVRYSLPTVMAMTEMAGRKGRMRMESQECAVEMSEQMLTTREFSRETMKSMAVCGESLEDSGLDS 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00470 178 PANTHER MYB PROTEIN-RELATED 20 111 - -
Adu02g00470 178 SMART sant 33 81 IPR001005 -
Adu02g00470 178 ProSiteProfiles Myb-like domain profile. 29 79 IPR001005 -
Adu02g00470 178 Gene3D - 35 101 - -
Adu02g00470 178 SUPERFAMILY Homeodomain-like 20 84 IPR009057 -
Adu02g00470 178 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 35 83 IPR017930 -
Adu02g00470 178 PANTHER TRANSCRIPTION FACTOR MYB73 20 111 - -
Adu02g00470 178 CDD SANT 36 79 IPR001005 -
Adu02g00470 178 Pfam Myb-like DNA-binding domain 36 78 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00470 Adu-Chr2 5853212 5857546 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00470 21 121 MYB Transcription Factor Family AT5G67300 59.223 2.79e-37 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu02g00470 Myb_DNA-binding 2.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00470 K09422 - aip:107641435 192.2