Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00459 ATGGCTAGAAGTGCCACAATTCCATTTCCAATACTTGATTTCATTCCTGTTGGATTCAGGTTCAAGCCAACAGATGAAGAGCTTGTGAGCTATTACCTCAATCACAAGCTCCTAAATGACAATTTTCCAATCAATATTATCCCTGACATTGATCTTTGCAAGGTTGAACCTTGGCAAATTCCAGCATTATCAAAGATAAAATCGGATGATCCAGAATGGTTCTTCTTTAGTGGACGTGATTACAAGTATGGAAAGAGCAAAAGATCAAACAGGGCAACCAAAGGAGGATATTGGAAAGCCACAGGACAAGATAGATACATAAAGGAAAGAGGAACTACCAATGTAATTGGGAGCAAGAAGACACTGGTTTTCTATAGTGGCCGTGTTCCTAATGGTGTCAAAACCAATTGGGTTATCCATGAGTATCATGCTACTACCTTTGATGATAGCCAGAGGAATTTTGTTTTGTGTCGCTTGATGAAGAAAGCCGAGAGAAAATCCGAAGATGGAACTGATGCACAAGCTTGTGATGAGGGGGAACCTAGCACTCATATGGAAGAAGCAGATGAGAGTGTCCCAAGTATGTTTGAGTCGCCAGATGTGGACATGGGTTCGATCTTCCACACACTGCCTCAAGACGGATCATCATCACAGCACTCTCCAGTCAGCATTGAACAGCAAGAATCCTTCCCATTCTCCCCATCTGAAAATTATTACCTTGTAAATGAAGATAGAAGTATGCATATACAATTCGAAACAAACGAAGAGAAGCAAGATGCTGAGAAATTTGCGGATTCGATTTTGGATGGTGGAAATATAGCTATGTTTGAAGAAAGACAGCAGCATCATACTTTCATGAATAATCACCTCCGCTCAGTCCCATCAATGAGGGTATGCTATGAAAGCAGTGACACAGATGCTGAAGTAGTCTCTAGACGGGCTGGTTCAAGAGAATACCATGTATCAAAAATGGTTCAATCATCACATGGTGCTGCGTGCACAGATAAAACTAGAAGTATCTCTTCAGAAGACTTTTGGGGATTGGATTCATCTTCATGTGACTCAAATGCAGATAAACCTTTTGAGATCAATTCTATTGAAATTTCTAGTCCTCCATCGGCTCTAAGTAGATCGAAAAATCAATATATTCCGAGGCTATCTCAAACACATAGGAAGGTTTCAAGCAATGCAATTCCCCATCTTGAGGTGAGAACACCGAGCAGCCAGACTAAACGACGAAGAAGCCTATCTTGA 1254 0.4099 MARSATIPFPILDFIPVGFRFKPTDEELVSYYLNHKLLNDNFPINIIPDIDLCKVEPWQIPALSKIKSDDPEWFFFSGRDYKYGKSKRSNRATKGGYWKATGQDRYIKERGTTNVIGSKKTLVFYSGRVPNGVKTNWVIHEYHATTFDDSQRNFVLCRLMKKAERKSEDGTDAQACDEGEPSTHMEEADESVPSMFESPDVDMGSIFHTLPQDGSSSQHSPVSIEQQESFPFSPSENYYLVNEDRSMHIQFETNEEKQDAEKFADSILDGGNIAMFEERQQHHTFMNNHLRSVPSMRVCYESSDTDAEVVSRRAGSREYHVSKMVQSSHGAACTDKTRSISSEDFWGLDSSSCDSNADKPFEINSIEISSPPSALSRSKNQYIPRLSQTHRKVSSNAIPHLEVRTPSSQTKRRRSLS 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00459 417 ProSiteProfiles NAC domain profile. 15 162 IPR003441 GO:0003677|GO:0006355
Adu02g00459 417 SUPERFAMILY NAC domain 14 162 IPR036093 GO:0003677|GO:0006355
Adu02g00459 417 MobiDBLite consensus disorder prediction 167 186 - -
Adu02g00459 417 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 13 376 - -
Adu02g00459 417 Gene3D NAC domain 24 167 IPR036093 GO:0003677|GO:0006355
Adu02g00459 417 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 13 376 - -
Adu02g00459 417 MobiDBLite consensus disorder prediction 389 417 - -
Adu02g00459 417 Pfam No apical meristem (NAM) protein 16 143 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00459 Adu-Chr2 5710335 5714012 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00459 12 162 NAC Transcription Factor Family AT4G35580 57.051 1.73e-55 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Adu02g00459 NAM 6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00459 - - adu:107473112 804.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g00459 02 5710335 5714012 Adu02g00459 02 5710335 5714012 ECH