Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00458 ATGGCAGAAACTCGGGTTCTACCTGTTGGATATAGGTTTCGTCCAACAGAAGAGGAAATTTTAATTCACTATCTCAATAACAAGCATTTGGGAAATGATGCAGAGATTAAGAACACTATTTCCCAAGTTGATCTTTGTAACTTTGATCCTTGGGATTTACCAGAACAATCGAAAGTGAAATCGGATGATCAAGAATGGTTTTTCTTCAATGAATTGAAATACATGAAAAACAAGCGGTGTAACAGAAAAACCAACATGGGATATTGGAAGATCACAGGAAAAGAGAGAATCGGGACAGACAGTGTCATAGGTACAAAAAGAACACTAGTTTTCTACGAGCGTCCACATAATGTCAAAACCAATTGGGTTCTTCATGAATATCATGCATTTGATCAAAAGAGCAACATCGTATTGAGCCGTGTAATAATGAATGCTGAGAAAAGGGAACAGAAGCTAAAGACAAAAGCAAGCAACATAGTCGAAGAGGAGGAAGTAAAATGTGAAGATGAACCATGCAGCGAAATTACTGACTGTGTTACCCAAGCAACTACAGAAGATGCAATCATTCCTGATAATGCATGTGTTTCATCCGAGCGACAACAACCTCAAGTTATAGATTATGAAATTCTCTCATCGGGACAACAATCTTCAGTGGCCCATTCCGGTAATGAAAACAATAATGCCGCGGAAGCAACATGGAGGCAAGATGCCGATATGAATATCGAGTATTTTTGGAATTTGCTGTTTTCTAGCATCGATGCTGACCCTCATGCTGAGTTCTTAAATTCGGTGTTGGCAGGGGATGATCAACTCTATGTTGATTCCGGCCACCATTGA 837 0.3943 MAETRVLPVGYRFRPTEEEILIHYLNNKHLGNDAEIKNTISQVDLCNFDPWDLPEQSKVKSDDQEWFFFNELKYMKNKRCNRKTNMGYWKITGKERIGTDSVIGTKRTLVFYERPHNVKTNWVLHEYHAFDQKSNIVLSRVIMNAEKREQKLKTKASNIVEEEEVKCEDEPCSEITDCVTQATTEDAIIPDNACVSSERQQPQVIDYEILSSGQQSSVAHSGNENNNAAEATWRQDADMNIEYFWNLLFSSIDADPHAEFLNSVLAGDDQLYVDSGHH 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00458 278 PANTHER NAC DOMAIN CONTAINING PROTEIN 49 9 209 - -
Adu02g00458 278 Pfam No apical meristem (NAM) protein 8 128 IPR003441 GO:0003677|GO:0006355
Adu02g00458 278 Gene3D NAC domain 16 150 IPR036093 GO:0003677|GO:0006355
Adu02g00458 278 SUPERFAMILY NAC domain 4 142 IPR036093 GO:0003677|GO:0006355
Adu02g00458 278 Coils Coil 142 162 - -
Adu02g00458 278 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 9 209 - -
Adu02g00458 278 ProSiteProfiles NAC domain profile. 7 144 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00458 Adu-Chr2 5654649 5658974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00458 6 133 NAC Transcription Factor Family AT1G33060 49.254 9.34e-39 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Adu02g00458 NAM 5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00458 - - aip:107626709 509.605