Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00457 ATGGAGTTGATGCAAGAATCCAACAAAGGCTACTCTCAAGATTTGGAAGAAGAAGAGGAGGAGGAAGAAGCACCGGGAGAAGAAACCACCACCGCCGCCGGGTTACACCATCATCAACATCAAGATGCAACAACATCAAATTACTTCAACCACACAACAAGAATGAATCAAAATCAACCGCAACCGCAACCGCAACAGTTAGTAGACTTTATGGACTTGTCACTTGGGACAAACATCAACCACCATGAAGGCATCAACAATTTCCAAGGATACTCCTCTTCCTCCGCCGCCGCCACCACCACCACCACAAATAATACAAATCTACAACCTCCGCTGCCTGCTCCGGCGGAGAAAGAGCACATGTTCGACAAAGTAGTGACGCCGAGCGACGTAGGGAAGCTGAACAGGCTGGTAATTCCCAAACAGCATGCGGAGAAGTACTTCCCGCTCGACTCGACGTCGAACGAGAAGGGACTTCTCCTGAATTTCGAAGACCGGAACGGGAAATTGTGGCGGTTCAGATACTCTTACTGGAACAGTAGCCAGAGCTATGTGATGACGAAAGGATGGAGCAGATTTGTGAAGGAGAAGAAACTTGATGCAGGTGACATTGTTTCTTTCCAACGCGGAGTTGGAGAAAATTATAGACATAGATTATACATAGATTGGAGAAGAAGACCTGATAATCATCACCATCACCATCACAACCTCCATGGAGGACTTGATTTTCCCTCTTCGTCTTCCAATTTCATCACGCCCTTCTTCATTCCCAGTCAAGCGTCTTCACATTACTCTACGATTCGATACGGTGGCAGATTTTACTCTCTGCCACCACCGCAATCGCAACCACAGCCACAGCCACAGCCACAACCGCAAATGATGATGTCACCAAGACATCATCATTATTATCCAATTCATCATGGTGGATATGGCGGCTATAATCATCCTCACAGTAATGAGTTGTTTTATCTGAGATCAACAACATCAACAACACTACCTTCTCCTCCTCCTCCTCCTTCTTCTTCTTCAATGTCAATGGTTGATCATCATCATTACCATCAAGGATTATTGGCAAGACAACAACAAGAACAAGAACAAGAAAGGGGGTCACCAATGATCATAGATTCAGTACCAATTGCTCATCATTTTCATCATCATGGGGGTGGTGGTGGTAATGGTAATAATGGTAGTAATAGTAATAGTAACAATAATAGTAACAATAATAATTCTGCAGGAAAAAGGTTAAGGCTATTTGGTGTGAACATGGAATGTGCTTCTTCTTCTTCAACAACAACACAAGAAGATCATCAAGAACAAGAACAAGAAGATCCAAAATGCTTCACCTTGTTCTCTTCTACTAACTCAAGGGATGGAGAAGATCAGAGAAGAAGAATAAGGGAGCAAGCTGCAAATTTTTTTGATTTGGACCCTTCTTTGCAATTCCGCCAACACTGA 1455 0.4371 MELMQESNKGYSQDLEEEEEEEEAPGEETTTAAGLHHHQHQDATTSNYFNHTTRMNQNQPQPQPQQLVDFMDLSLGTNINHHEGINNFQGYSSSSAAATTTTTNNTNLQPPLPAPAEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSTSNEKGLLLNFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGENYRHRLYIDWRRRPDNHHHHHHNLHGGLDFPSSSSNFITPFFIPSQASSHYSTIRYGGRFYSLPPPQSQPQPQPQPQPQMMMSPRHHHYYPIHHGGYGGYNHPHSNELFYLRSTTSTTLPSPPPPPSSSSMSMVDHHHYHQGLLARQQQEQEQERGSPMIIDSVPIAHHFHHHGGGGGNGNNGSNSNSNNNSNNNNSAGKRLRLFGVNMECASSSSTTTQEDHQEQEQEDPKCFTLFSSTNSRDGEDQRRRIREQAANFFDLDPSLQFRQH 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00457 484 MobiDBLite consensus disorder prediction 278 292 - -
Adu02g00457 484 MobiDBLite consensus disorder prediction 273 301 - -
Adu02g00457 484 Coils Coil 1 21 - -
Adu02g00457 484 MobiDBLite consensus disorder prediction 13 27 - -
Adu02g00457 484 MobiDBLite consensus disorder prediction 1 42 - -
Adu02g00457 484 MobiDBLite consensus disorder prediction 381 412 - -
Adu02g00457 484 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA2 85 452 - -
Adu02g00457 484 CDD B3_DNA 120 221 IPR003340 GO:0003677
Adu02g00457 484 Pfam B3 DNA binding domain 122 226 IPR003340 GO:0003677
Adu02g00457 484 SUPERFAMILY DNA-binding pseudobarrel domain 118 227 IPR015300 -
Adu02g00457 484 SMART B3_2 122 227 IPR003340 GO:0003677
Adu02g00457 484 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 85 452 IPR044800 GO:0003700
Adu02g00457 484 ProSiteProfiles B3 DNA-binding domain profile. 122 225 IPR003340 GO:0003677
Adu02g00457 484 MobiDBLite consensus disorder prediction 425 462 - -
Adu02g00457 484 MobiDBLite consensus disorder prediction 327 347 - -
Adu02g00457 484 Gene3D - 116 237 IPR015300 -
Adu02g00457 484 MobiDBLite consensus disorder prediction 391 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00457 Adu-Chr2 5608907 5611537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00457 116 430 RAV Transcription Factor Family AT2G46870 44.688 1.45e-71 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Adu02g00457 B3 1.9e-28 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00457 - - gsj:114390989 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g00457 02 5608907 5611537 Adu02g00457 02 5608907 5611537 ECH