Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00450 ATGATGGACGCGTACTCCTCTGGAGAGGAAGTGGTTATTAAGACTAGGAAACCTTATACAATCACCAAGCAAAGAGAACGATGGACAGAGGAGGAGCATAACCGATTTCTAGAAGCTTTGAAGCTCCATGGGCGGGCATGGCAGCGAATAGAAGAGCATATTGGAACAAAAACTGCCGTGCAGATCAGGAGCCATGCGCAGAAGTTCTTTACAAAGTTGGAGAAAGAGGCCCAGGCAAAGGGTGTTCCAATTGGACAAGCTCTTGACATAGAAATCCCCCCTCCACGACCCAAAAGAAAACCGAGCAATCCTTATCCTCGGAAGACCAGTGCTGGTGCCGCATCATTGCATAGTGGAGCAAAGGATGGAAAACTCAGTTCTCTTGAATCTTCACATGCTAAACAAGCACTGGACTTGGAAAAGGAACCTGTTCCAGAGAAACATAATGGAGACAAAGTGTCACATGTAAAAGAAAATAAGGATGAGAACTGCTCTAAAGTATTTGCTCTTCTCCAGGAGTTACCATGTTCTTCGGTTTCTTCAGCAAACAAGAGTTCAATATCGTGGTCAGTGCCACTGCAAAATTCATGCGGCTTAAGGGAGATTATACCTTCAGTGAAAGAGGTAATAGCGAAAGATGGAACAAATAAATCTTTTGTTACTATTGAACTTGAAAATCGGAAGTTGGAGATAGATGATGGGAAGCAGACTAATGGAAACTCCAGTTTGGAGAATTCTGATACAGTGAAATTGGTTCAAAATGAAAAAACAGATGGTCTTAACTGTGAACTAACCATAGATGGGATACAAGGCAATCAGAATTATCCGAGACATGTTACTGTGCACGTTGTTGATGGGAAACTCGGAACAAGTACTGCAAATCCATCCCAAGATATGGTGTTTCAAGATTCTATGTTTCAGCCACTAGGAGGGATTAATGGGCAACCTAATCTTTTCACCAATTCAACCGCATCAAACACGAGCGAGAGCCAAAACAACACAGAGAGATCTTCTGTTCATCAATCATTTCTTCCTTACCCTCCCTTCATACAAAATAATCAAGGCGATTACCAATCATTTCTTCAAATGTCTTCCACATTTTCAAGTCTTATTGTGTCTACCTTGCTGCAAAACCCAGCAGCACATGCTGCCGCAAGTTTTGCAGCTACTTTCTGGCCCTGTGCAAATTCAGAAGCTTCAGCAGATTCTCCTACGTGCTCTCAAGGAGGTTTTCCACCCAGACAGAATGGCTCTCCTCCAAGTGTGGCGGCTATTGCAGCCGCCACTGTAGCTGCTGCAACTGCATGGTGGGCTGCCCATGGACTGCTTCCTCTGTGTGCTCCACTCCATACTGCTTTTGCTTGTCCTCCAACATCAATGCCTGCAGTTCCATCAATCAATACTGGTGAAGCACCAGCACCAGCACCAGCACCGGTACAAGAACCGGCACCAATACCAACATCAGAGACAGAACAAGAGAAGAATAGTCTGCAAAATCCTCCTCAGCAGGACCAGACACTTGATCCTGTATGCTCGGAAGCTCAACAAGCACAACAGTCACCTTCTAAGTCCCCAGTTGATATCTCATCAGATTCTGAGGAGAGTGGAGATGCCAAGTTACATGCTTCGCCGTCCAAGGCTACTGATCAAGAGTTGAACAAAGAAATATCCGAGCACATTGATTCCAACAAAGCAAAAGGTAGAAAACCAGTTGACCGATCCTCATGTGGTTCCAACACAACCTCTAGCAGCGAATTGGAGACTGATGCATTAGAGAAGGATGAGCAAGGGAAGGAAGAGCCTGAAACAGCTGATGCTAACAATTTAGCCATTGACTCTAGTAATCGTCGTAGTAGAAGTGTTAGCAACCTTACTGATTCTTGGAAAGAGGTCTCCGAGGAGGGGCGACTGGCCTTTCAGGCTCTCTTTGCCAGAGAGGTGTTGCCACAAAGCTTTTCGCCTCCGCCCGATTTGCTAAACAAGGATCAGGAAATGGACAGCATCAAGGATAACAAGCAAACCACAGATATCAAGGATGAAGGCCAAGACAGCAAGAAATGCAGTTCTATTTTCGAGGGTATTCAGAAAATGATGCCATGTATAGAGAATAATGAGGAAGAGGGACTGCTAACCATAGGACTTGGACAAGGAAAGCTCAAGACTCGTCGAACCGGCTTCAAACCTTACAAAAGATGTTCAATGGAGGCCAAGGAGAACAGGGTTGGAAGCACGGGGAACCAAGGTGAAGAGCAAGGGTCAAAGAGAATACGCTTAGAAGGGGAGGCTTCAACTTGA 2295 0.4519 MMDAYSSGEEVVIKTRKPYTITKQRERWTEEEHNRFLEALKLHGRAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEAQAKGVPIGQALDIEIPPPRPKRKPSNPYPRKTSAGAASLHSGAKDGKLSSLESSHAKQALDLEKEPVPEKHNGDKVSHVKENKDENCSKVFALLQELPCSSVSSANKSSISWSVPLQNSCGLREIIPSVKEVIAKDGTNKSFVTIELENRKLEIDDGKQTNGNSSLENSDTVKLVQNEKTDGLNCELTIDGIQGNQNYPRHVTVHVVDGKLGTSTANPSQDMVFQDSMFQPLGGINGQPNLFTNSTASNTSESQNNTERSSVHQSFLPYPPFIQNNQGDYQSFLQMSSTFSSLIVSTLLQNPAAHAAASFAATFWPCANSEASADSPTCSQGGFPPRQNGSPPSVAAIAAATVAAATAWWAAHGLLPLCAPLHTAFACPPTSMPAVPSINTGEAPAPAPAPVQEPAPIPTSETEQEKNSLQNPPQQDQTLDPVCSEAQQAQQSPSKSPVDISSDSEESGDAKLHASPSKATDQELNKEISEHIDSNKAKGRKPVDRSSCGSNTTSSSELETDALEKDEQGKEEPETADANNLAIDSSNRRSRSVSNLTDSWKEVSEEGRLAFQALFAREVLPQSFSPPPDLLNKDQEMDSIKDNKQTTDIKDEGQDSKKCSSIFEGIQKMMPCIENNEEEGLLTIGLGQGKLKTRRTGFKPYKRCSMEAKENRVGSTGNQGEEQGSKRIRLEGEAST 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00450 764 MobiDBLite consensus disorder prediction 607 628 - -
Adu02g00450 764 MobiDBLite consensus disorder prediction 317 345 - -
Adu02g00450 764 MobiDBLite consensus disorder prediction 662 685 - -
Adu02g00450 764 PANTHER SWI/SNF COMPLEX-RELATED 3 746 - -
Adu02g00450 764 Pfam Myb-like DNA-binding domain 25 68 IPR001005 -
Adu02g00450 764 MobiDBLite consensus disorder prediction 649 685 - -
Adu02g00450 764 MobiDBLite consensus disorder prediction 551 571 - -
Adu02g00450 764 MobiDBLite consensus disorder prediction 587 602 - -
Adu02g00450 764 MobiDBLite consensus disorder prediction 84 158 - -
Adu02g00450 764 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 23 72 IPR006447 GO:0003677
Adu02g00450 764 CDD SANT 27 70 IPR001005 -
Adu02g00450 764 Gene3D - 27 74 - -
Adu02g00450 764 MobiDBLite consensus disorder prediction 730 764 - -
Adu02g00450 764 ProSiteProfiles SANT domain profile. 23 74 IPR017884 -
Adu02g00450 764 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 74 IPR017930 -
Adu02g00450 764 ProSiteProfiles Myb-like domain profile. 20 70 IPR001005 -
Adu02g00450 764 PANTHER PROTEIN LHY 3 746 - -
Adu02g00450 764 SUPERFAMILY Homeodomain-like 19 75 IPR009057 -
Adu02g00450 764 MobiDBLite consensus disorder prediction 485 529 - -
Adu02g00450 764 MobiDBLite consensus disorder prediction 465 630 - -
Adu02g00450 764 MobiDBLite consensus disorder prediction 134 158 - -
Adu02g00450 764 SMART sant 24 72 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00450 Adu-Chr2 5524324 5530983 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu02g00450 Myb_DNA-binding 2.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00450 K12133 - gmx:100101859 1090.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g00450 02 5524324 5530983 Adu02g00450 02 5524324 5530983 ECH