Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00445 ATGGCTCCATCATTAGAGAGCAATAAAAATGTTGTTATTGATGATGAATCCAATAAGAATCTTCTTAAAGAAGAAGAAGAAGATGGAATGCTTTTTGCAATGGACTTGGGGGTTTTAGTGGCGTTTCCAATGGCTGTTAAGACTGCATTTGAGCTTGGAATCTTTGACATAATAGCCAAAGGTGGTGAACATGCAAAGTTCTCATCTGAAGACATTGCATCACAGATTGGTAGCACAAATCCTAATGCACCATCAATGGTGGATCGTCTTCTTAGGCTACTCGCAAGTCATTTTTTGTTGTCTTTCACCAAAGATGAAGATGATCAAGAACATGGGCTTATTGCATCTCCTCAGAAGACTGTGTATAGTCTTACAGCTGCTTCCAAATATTTTGTAACTGATGATGATGGTGTCAATTTTGGACACACTTTGAGCTTGATTCTGGACAAGGTTGTCTTGGAAAGCTGGTCAGTTGAACTGAAAGGAGCAATATTGGAAGGAGGTGTGCCATTTGTTAGGGTTAATGGGATGCACACATTTGAGTACCCAAGTGTGGATCCAAGGTTCAATGATGTTTTCAACAAAGCTATGATAAGCCACACAACCATAGTGATGAAGAGGGTTCTTGAGTCCTATGAAGGTTTCAACAACATTAACATATTATTATTATTCCTTTTTTATTTTTTATTGTTATTTTTTATATATATATTTTTTGTATATTTTGTAGGTGTGAAACATGTGGGAGGAGATATGTTTGAGAGTGTTCCTAACGGCGGAGATGCCATTTTCATGAAGTGGATACTTCATGATTGGAGTGATGAACATTGCTTGAAGGTGTTGAAGAATTGCCATAAAGCCATTCCTGAAGATGGAAAAGTGATTGTTGTGGACACAATGGTTCCGGTATTGCCGGAGAATAAAACCGCCGCTAAGGTTGCTTTCAAAGCTGACTTATTGATGATGACTCAAAACATTGGAGGAAAAGAGAGAACCAAACATGACTTCATTCATTTGGCCACTCTTTCTGGATTTTCTTCCATCAAATTTGTATGCTCTGTCTCTGGATATTGGGTTATGGAGTTCTACAAGTAG 1092 0.381 MAPSLESNKNVVIDDESNKNLLKEEEEDGMLFAMDLGVLVAFPMAVKTAFELGIFDIIAKGGEHAKFSSEDIASQIGSTNPNAPSMVDRLLRLLASHFLLSFTKDEDDQEHGLIASPQKTVYSLTAASKYFVTDDDGVNFGHTLSLILDKVVLESWSVELKGAILEGGVPFVRVNGMHTFEYPSVDPRFNDVFNKAMISHTTIVMKRVLESYEGFNNINILLLFLFYFLLLFFIYIFFVYFVGVKHVGGDMFESVPNGGDAIFMKWILHDWSDEHCLKVLKNCHKAIPEDGKVIVVDTMVPVLPENKTAAKVAFKADLLMMTQNIGGKERTKHDFIHLATLSGFSSIKFVCSVSGYWVMEFYK 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00445 363 Gene3D - 10 131 IPR036388 -
Adu02g00445 363 Gene3D Vaccinia Virus protein VP39 240 363 IPR029063 -
Adu02g00445 363 Gene3D Vaccinia Virus protein VP39 132 222 IPR029063 -
Adu02g00445 363 SUPERFAMILY "Winged helix" DNA-binding domain 24 134 IPR036390 -
Adu02g00445 363 PANTHER O-METHYLTRANSFERASE 1 221 IPR016461 GO:0008168
Adu02g00445 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 243 362 IPR029063 -
Adu02g00445 363 PIRSF O-mtase 12 222 IPR016461 GO:0008168
Adu02g00445 363 PIRSF O-mtase 240 363 IPR016461 GO:0008168
Adu02g00445 363 Pfam Dimerisation domain 44 95 IPR012967 GO:0046983
Adu02g00445 363 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 34 363 IPR016461 GO:0008168
Adu02g00445 363 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 242 363 - -
Adu02g00445 363 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 221 - -
Adu02g00445 363 PANTHER O-METHYLTRANSFERASE 242 363 IPR016461 GO:0008168
Adu02g00445 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 140 219 IPR029063 -
Adu02g00445 363 Pfam O-methyltransferase domain 243 345 IPR001077 GO:0008171
Adu02g00445 363 Pfam O-methyltransferase domain 159 221 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00445 Adu-Chr2 5419610 5423215 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00445 26 363 Monolignol Biosynthesis Gene Families AT5G54160 41.573 1.80e-92 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00445 K13066 - aip:107624476 574.318