Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00443 ATGGCTCCATCATTAGAGAGCAATAAAAATGTTGTTATTGATGATGAATCCAATAAGAATCTTCTTAAAGAAGAAGAAGAAGATGGAATGCTTTTTGCAATGGATTTGGGGGTTTTAGTGGCGTTTCCAATGGCTGTTAAGACTGCATTTGAGCTTGGAATCTTCGACATAATAGCCAAAGGTGGTGAACATGCAAAGCTCTCATCTGAAGACATTGCATCACAGATTGGTAGCATAAACCCTAATGCACCATCGATGGTGGATCGCCTTCTTAGGCTCCTTGCAAGTCATTCTTTGTTGTCTTTCACCAAAGATGAAAATGATCAAGAACATGAGCTTATTGCATCTCCTAAGAAGAATGTGTATAGTCTTACAGCTGCTGCTTCCAAATATTTTGTGACTGATGATGATGGTGTCAATTTTGGACACAGTTTGAGCTTGATTCTGGATAAGGTTTTCTTGGAAAGCTGGAGTGAACTGAAAGGAGCAATATTGGAAGGAGGTGTGCCATTTGTTAGGGTTAATGGGATGCATGCATTTGAGTACCCAAGTGTGGATCCAAGGTTCAATGATGTTTTCAACAAAGCTATGATAAGCCACACAAGCATATTGATGAAGAGGGTTCTTGAGTCCTATGAAGGTTTCAACAACATTAACACTATAATTGATGTTGGTGGTGGTCTTGGTGTGAAACATGTGGGAGGAGATATGTTTGAGAGTGTTCCTAACGGAGATGCCATTTTCATGAAGTGCATACTTCATGATTGGAGTGATGAACATTGCTTGAAGGTGTTGAAGAATTGCCATAAAGCCATTCCTGAAGATGGAAAAGTGATTGTTGTAGACATAATGGTTCCGGTTTTTCCGGAGAATAAAACCGCCGCTAAGGCTGCTTTCAAAGCTGACTTATTGATGATGACTCAAAACATTGGAGGAAAAGAGAGAACCAAACATGACTTCATTCATTTGGCCACTGCTTCTGGATTTTCTTCCATCAAATTTGTGTGCTCTGTCTCTGGATATTGGGTTATGGAGTTCTACAAGTAG 1047 0.3983 MAPSLESNKNVVIDDESNKNLLKEEEEDGMLFAMDLGVLVAFPMAVKTAFELGIFDIIAKGGEHAKLSSEDIASQIGSINPNAPSMVDRLLRLLASHSLLSFTKDENDQEHELIASPKKNVYSLTAAASKYFVTDDDGVNFGHSLSLILDKVFLESWSELKGAILEGGVPFVRVNGMHAFEYPSVDPRFNDVFNKAMISHTSILMKRVLESYEGFNNINTIIDVGGGLGVKHVGGDMFESVPNGDAIFMKCILHDWSDEHCLKVLKNCHKAIPEDGKVIVVDIMVPVFPENKTAAKAAFKADLLMMTQNIGGKERTKHDFIHLATASGFSSIKFVCSVSGYWVMEFYK 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00443 348 Pfam Dimerisation domain 44 95 IPR012967 GO:0046983
Adu02g00443 348 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 229 348 - -
Adu02g00443 348 SUPERFAMILY "Winged helix" DNA-binding domain 24 133 IPR036390 -
Adu02g00443 348 PIRSF O-mtase 12 231 IPR016461 GO:0008168
Adu02g00443 348 PIRSF O-mtase 228 348 IPR016461 GO:0008168
Adu02g00443 348 PANTHER O-METHYLTRANSFERASE 229 348 IPR016461 GO:0008168
Adu02g00443 348 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 139 347 IPR029063 -
Adu02g00443 348 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 230 - -
Adu02g00443 348 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 34 348 IPR016461 GO:0008168
Adu02g00443 348 Gene3D - 10 132 IPR036388 -
Adu02g00443 348 Gene3D Vaccinia Virus protein VP39 230 338 IPR029063 -
Adu02g00443 348 Gene3D Vaccinia Virus protein VP39 133 229 IPR029063 -
Adu02g00443 348 Pfam O-methyltransferase domain 230 330 IPR001077 GO:0008171
Adu02g00443 348 Pfam O-methyltransferase domain 157 229 IPR001077 GO:0008171
Adu02g00443 348 PANTHER O-METHYLTRANSFERASE 1 230 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00443 Adu-Chr2 5398435 5402098 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00443 16 348 Monolignol Biosynthesis Gene Families AT5G54160 41.644 8.16e-99 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00443 K13066 - aip:107624476 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g00443 02 5398435 5402098 Adu02g00443 02 5398435 5402098 ECH