Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00429 ATGATGGATTGTAACAACAATACAAGGAAACACAATGATTCAAGTTCTAACAAAATATTTGTTGGAGGGTTGGCTTGGGAGACTCAAAAGGAGACCCTGAGAAGATATTTTGAGCAATTTGGAGATATTATAGAGGCTGTTGTCATAACAGACAAGAACACTGGAAGGTCCAAGGGTTATGGCTTTGTCACATTCAAGGATCCAGAGGCAGCAAAGAAAGCATGCCAAAATCCATCTCCAATAATTGATGGGAGAAGGGCAAATTGTAATATTGCATCAACTGCTGCAAACAAGAAACACTCTTCACAAACTCCTCAACATGAAAGGTTTAAACCAGTGGCTGGAATATTGGCTTCACCTTCTCATCATCATTTTGTTCCTTCATCAACATTTTTCCATCAACCTAATGAACAATTCAGAATTCCTTATCCAACTTATAGATATAATGGATACTCACAAGAAACAATGGTCTCTATGAATTGTTATGCTATCTATGGAGGTCAACAATTCTCACCTTACTACCCTTCCAATAATGGGGCAATAGGGCCATTAGGGTTTATCCCTAATATTTACCCTTTGAATGCTCAATATGCACATAGATATCATAGTCATCAAGGTCATGGTTTTAGGGTTCAATATCCACAAATGATGCACATTCCAGTTTTACCCCCTAGAAGACCATATGGCTCACCTGGTATCTTGACTTTTCCTCCTTCAATGCCAACACCACCAATTAGTAACTCAGTGACAAGAAGAACTGCTACTAAAAAAACAGAAGTGGCAACAAGAAAAGGTGCAAGTGCTTCAAGACCCAAAAGAACTTCTTCTATCTAA 834 0.3837 MMDCNNNTRKHNDSSSNKIFVGGLAWETQKETLRRYFEQFGDIIEAVVITDKNTGRSKGYGFVTFKDPEAAKKACQNPSPIIDGRRANCNIASTAANKKHSSQTPQHERFKPVAGILASPSHHHFVPSSTFFHQPNEQFRIPYPTYRYNGYSQETMVSMNCYAIYGGQQFSPYYPSNNGAIGPLGFIPNIYPLNAQYAHRYHSHQGHGFRVQYPQMMHIPVLPPRRPYGSPGILTFPPSMPTPPISNSVTRRTATKKTEVATRKGASASRPKRTSSI 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00429 277 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 19 77 IPR000504 GO:0003723
Adu02g00429 277 SUPERFAMILY RNA-binding domain, RBD 10 96 IPR035979 GO:0003676
Adu02g00429 277 PANTHER - 4 243 - -
Adu02g00429 277 MobiDBLite consensus disorder prediction 237 277 - -
Adu02g00429 277 CDD RRM_RBM24_RBM38_like 18 92 - -
Adu02g00429 277 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 17 94 IPR000504 GO:0003723
Adu02g00429 277 Gene3D - 2 112 IPR012677 -
Adu02g00429 277 PANTHER BOULE-RELATED 4 243 IPR037366 GO:0003729
Adu02g00429 277 SMART rrm1_1 18 90 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00429 Adu-Chr2 5158109 5161518 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00429 13 93 C2H2 Transcription Factor Family AT2G19380 44.444 6.56e-17 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00429 - - ahf:112729575 561.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g00429 02 5158109 5161518 Adu02g00429 02 5158109 5161518 ECH