Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00417 ATGGGAAAGAAAGGAAGTAGTAGTAGTAGTTCATGGTTGACTGCAGTTAAAAGAGCATTCAGATCTCCAACAAAAGACATTGAAAACAAAAGAAGCAATAGAAGAAGAAGTGAAGAAAGCTTTGATCAAGAAGAAGAAGAAGATAAGAAGAGAGAAAAGAAAAGATGGATTTTTAGAAAAGCTGTGAATCATGAAAGCAACAACAATAACAACACTAATCAACAAAACCCAACAAAGTTGAAGCATAATCATAATCAAAATCATCATAATCATGATGTGGCTGCAGCAGCAACAACTGCTACTACTAATAATTGTTCTACAACAACAAGTGGAGGATCAAGAAGTGAACAAGATCAGAAGCATGCTCTTGCAGTTGCTGTGGCAACAGCTGAAGCTGCCATGGCAACTGCTCAAGCTGCAGTTGAAGCTGCAAGGTTGAATAACCCTAATAATAATCCTACTAATAGTAATAATAATGGTGCTGCTAATTACCATCATCATCATGCTAGGGTGCATTATTCTGCTATAGTGATTCAAACAGCTTTTAGAGGATACTTGGCAAGAAGAGCACTAAGAGCATTAAAAGGGTTGGTGAAATTGCAAGCATTGGTAAGAGGACACAATGTAAGAAAACAAGCAAAGATGACACTAAGGTGCATGCAGGCACTTGTTAGGGTCCAAGCAAGGGTTCTTGATCAGAGAATAAGGTCTTCATCACATGATGGAAGCAGAAAATCCACATTCAGTGACACTGCTAGTGTTTGGGATCATTCCCGGTATCTTCAGGATATTTCTGATAGAAAATCACTATCAAGAGAAGGAAGCAGCATTGCAGATGATTGGGATGAACGTCCTCACACAGTTGAAGAAGTGAAAGCAATGTTGCAACAGAGAAAGGAAGCTGCCATGAAAAGGGATAAGTCCTTAACTCAAGCTTTTTCCCAGCAGATATGGAGGAATGGAAGAAAATCGTCAATTGGAAACGAAGATGAGCTTGAAGAAAGGCCTAAATGGCTCGACCGATGGATGGCCACGAAGCCTTGGGAGACAAGGGGAAGAGCTTCAACTGACCAAAGAGATCCAATTAAGACAGTGGAAATTGACACCTCGCAGCCTTACTCGTACCTTGGAACCAATTACAGGAGATCACATCCAAACTATCAATATAACCCTCACCACCATCAACCTCAAAGGCATTCCATCGCTTCACCGCTACATAGATCACACCAAAATGGATCCCTTCACCCCTCAACTGCAACACCATCCCCAGCAAAATCTAGGTCGATACAAGTCCGGTCTGCGAGCCCTCGGTGTGTTAGAGATGATAGAAGCTACCACACTTCTCAGACACCAAGTTTGAGGTCTAATTATCATTACACCGGTAGCTTGTGTCAAAATGGCGGTCGATCCGGAACAAGCAGTGGTGGTAGTGGTACATTGCCTAATTACATGGCAGCAACCGAGTCTGCGAAGGCTAGGATTCGGTCACAGAGTGCGCCAAGACAAAGGCCGTCCACGCCAGAGAGGGACAGAGTTGGTGGTGCAAAGAAAAGGCTCTCTTTTCCTGTTCCTCCTGATCCATATAATGTAGGAATAGGGTATGGAAATTATGGGCATAGTTTGAGGAGTCCAAGTTTCAAGAGCGTAAGTGCTTCACATTTTGGGTTGGAACAACAATCCAATTACTCTTCTTGCTGCACTGAGAGTCTTGGTGGTGAGGTTTCTCCTTCTTCAACTAGTGATCTTAGAAGGTGGTTGAGGTAA 1764 0.4263 MGKKGSSSSSSWLTAVKRAFRSPTKDIENKRSNRRRSEESFDQEEEEDKKREKKRWIFRKAVNHESNNNNNTNQQNPTKLKHNHNQNHHNHDVAAAATTATTNNCSTTTSGGSRSEQDQKHALAVAVATAEAAMATAQAAVEAARLNNPNNNPTNSNNNGAANYHHHHARVHYSAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRIRSSSHDGSRKSTFSDTASVWDHSRYLQDISDRKSLSREGSSIADDWDERPHTVEEVKAMLQQRKEAAMKRDKSLTQAFSQQIWRNGRKSSIGNEDELEERPKWLDRWMATKPWETRGRASTDQRDPIKTVEIDTSQPYSYLGTNYRRSHPNYQYNPHHHQPQRHSIASPLHRSHQNGSLHPSTATPSPAKSRSIQVRSASPRCVRDDRSYHTSQTPSLRSNYHYTGSLCQNGGRSGTSSGGSGTLPNYMAATESAKARIRSQSAPRQRPSTPERDRVGGAKKRLSFPVPPDPYNVGIGYGNYGHSLRSPSFKSVSASHFGLEQQSNYSSCCTESLGGEVSPSSTSDLRRWLR 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00417 587 ProSiteProfiles IQ motif profile. 195 222 IPR000048 GO:0005515
Adu02g00417 587 Gene3D - 168 222 - -
Adu02g00417 587 SMART iq_5 170 192 IPR000048 GO:0005515
Adu02g00417 587 SMART iq_5 193 214 IPR000048 GO:0005515
Adu02g00417 587 Pfam IQ calmodulin-binding motif 174 192 IPR000048 GO:0005515
Adu02g00417 587 Pfam IQ calmodulin-binding motif 198 214 IPR000048 GO:0005515
Adu02g00417 587 MobiDBLite consensus disorder prediction 349 522 - -
Adu02g00417 587 Pfam Protein of unknown function (DUF4005) 435 536 IPR025064 -
Adu02g00417 587 Coils Coil 127 147 - -
Adu02g00417 587 ProSiteProfiles IQ motif profile. 172 199 IPR000048 GO:0005515
Adu02g00417 587 PANTHER PROTEIN IQ-DOMAIN 1-LIKE ISOFORM X1 7 587 - -
Adu02g00417 587 MobiDBLite consensus disorder prediction 564 587 - -
Adu02g00417 587 PANTHER IQ-DOMAIN 5-RELATED 7 587 - -
Adu02g00417 587 Coils Coil 27 47 - -
Adu02g00417 587 MobiDBLite consensus disorder prediction 21 61 - -
Adu02g00417 587 MobiDBLite consensus disorder prediction 445 484 - -
Adu02g00417 587 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 215 IPR027417 -
Adu02g00417 587 MobiDBLite consensus disorder prediction 349 364 - -
Adu02g00417 587 MobiDBLite consensus disorder prediction 365 433 - -
Adu02g00417 587 MobiDBLite consensus disorder prediction 1 86 - -
Adu02g00417 587 MobiDBLite consensus disorder prediction 1 17 - -
Adu02g00417 587 MobiDBLite consensus disorder prediction 62 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00417 Adu-Chr2 4902616 4905590 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00417 12 587 IQD Protein Family AT4G00820 55.219 1.13e-180 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00417 - - adu:107472901 1013.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g00417 02 4902616 4905590 Adu02g00417 02 4902616 4905590 ECH