Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00413 ATGATCTCCAAGAAGAAGGGTAGAGGAACGGAAACAACAAAAATTACAAAGACAACGACAGCGGCAGCAACAACGAAGTCTCGTACCCGTGTTGGCAAGTATGAACTTGGAAGGACCATTGGCGAGGGAAGCTTTGCGAAGGTCAAAATTGCAAGAAACGTTGATAACGGCCAAAGTGCTGCCATTAAGATCCTCGTCAAAAACCAGATTGTGAAACATCCTAGGATGATGGAACAGCTGAAGAAGGAAATCTCTACGATGAAGATGGTCCAACATCCAAACGTGATCAAAATTTATGAGGTGATGGCAAGCAAAACAAAGATTTACATTGTCTTAGAGTTGATCAAGGGAGGAGAACTATTTGACAAAATTGCCAGAAAAGGGAGACTAGAAGAAAATGAAGCAAGAAGCTATTTTCATCAATTAATCAATGCAGTTGATTATTGCCACAGTAGAGGAGTTTATCATAGAGATTTGAAGcctgaaaatcttcttctggacaaaaatgatattcttagagtttcagattttggattGAGCACATTCGTACAGCGAGAGGATAAACTTCTGCACACTACCTGCGGAACCCCTAATTATGTTGCACCTGAGGTGATCCATAATGGAGGTTATGATGGTTCTGCAGCTGATATATGGTCTTGTGGAGTCATTCTCTTTGTACTCATGGCTGGATACTTGCCTTTTGATGAACCAAATCAAATTGCACTCTTCAGAAAACAACTCAATTTTGTATATTTGTTTCGGATTGAAAAGGCTGAGTATGTTTTTCCACCGTGGTTTTCCAAGGAGGCAAAGAAACTACTAAGTCGCATTCTTGATCCAAACCCTCTCACAAGGATAAAAATTTCAGAAATATTACAAGATGAATGGTTTAGAAAAGGATACAAACCACCAATATTTAAAGAGGAAGAAGAAATAAATACAGACGATGTGACTGCTGCTTTTGATGATTCCAGGGAAAATCTGGTGACAGAAACAAAAGAGAAACCGGCCTCACTGAACGCTTTTGAGCTCATTTCAAGATCAAAGACCTTTAACCTTGAAAGTATGTTTGAGCAGAAATCACTAGGAATGGTAAAGAGAGAAACACATTTTACCTCACAGTGCCCTCCAAATGAAATTATGTCTAAAATTGAGGAAGCTGCCAAGCCTCTTGGATTCAATGTTCACAAGCACAATTATAAGATGAAGTTGCAAGGTGATAAGAGTGGAAGGAAGGGTCATCTTTCAGTGGCTACTGAGGTTTTCGAGGTAGCACCCTCCTTGCACGTGGTGGAATTGCGAAAAACAGGGGGAGATACATTGGAGTTTCACAAGTTCTACAAAAGCTTTTCATCAGGGTTGCAAGACATAGTGTGGCATTCTGAAGAGAACAAAATTGACGAGGAATGA 1410 0.3865 MISKKKGRGTETTKITKTTTAAATTKSRTRVGKYELGRTIGEGSFAKVKIARNVDNGQSAAIKILVKNQIVKHPRMMEQLKKEISTMKMVQHPNVIKIYEVMASKTKIYIVLELIKGGELFDKIARKGRLEENEARSYFHQLINAVDYCHSRGVYHRDLKPENLLLDKNDILRVSDFGLSTFVQREDKLLHTTCGTPNYVAPEVIHNGGYDGSAADIWSCGVILFVLMAGYLPFDEPNQIALFRKQLNFVYLFRIEKAEYVFPPWFSKEAKKLLSRILDPNPLTRIKISEILQDEWFRKGYKPPIFKEEEEINTDDVTAAFDDSRENLVTETKEKPASLNAFELISRSKTFNLESMFEQKSLGMVKRETHFTSQCPPNEIMSKIEEAAKPLGFNVHKHNYKMKLQGDKSGRKGHLSVATEVFEVAPSLHVVELRKTGGDTLEFHKFYKSFSSGLQDIVWHSEENKIDEE 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00413 469 ProSiteProfiles NAF domain profile. 334 358 IPR018451 GO:0007165
Adu02g00413 469 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 24 461 - -
Adu02g00413 469 Pfam Protein kinase domain 34 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g00413 469 Gene3D Kinase associated domain 1, KA1 333 460 - -
Adu02g00413 469 PANTHER - 24 461 - -
Adu02g00413 469 CDD CIPK_C 340 454 - -
Adu02g00413 469 ProSitePatterns Protein kinases ATP-binding region signature. 40 63 IPR017441 GO:0005524
Adu02g00413 469 Pfam NAF domain 336 397 IPR004041 GO:0007165
Adu02g00413 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Adu02g00413 469 Gene3D Transferase(Phosphotransferase) domain 1 115 303 - -
Adu02g00413 469 MobiDBLite consensus disorder prediction 1 26 - -
Adu02g00413 469 SUPERFAMILY Protein kinase-like (PK-like) 31 335 IPR011009 -
Adu02g00413 469 ProSiteProfiles Protein kinase domain profile. 34 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g00413 469 SMART serkin_6 34 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g00413 469 Gene3D Phosphorylase Kinase; domain 1 22 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00413 Adu-Chr2 4826282 4838817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00413 23 462 CBL-interacting serine-threonine protein kinases AT1G01140 69.128 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Adu02g00413 Pkinase 1.1e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00413 - - lja:Lj3g3v2483040.1 694.115