Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00409 ATGAGTAGCAGCAAGAGCAACAAGAAAGGAGGAAGAGGAGGAGGAGCGCCACCGCCTCCAAGGGCGCCGGCTCGCACCTGCGTGGGGAAGTATGAGCTTGGAAAGACTATCGGAGAAGGAAGCTTCGCGAAGGTTAAGTTCGCCAAGAACGTTGAGAATGGAGATCATGTTGCCATCAAGATCCTTGACAAGTCCCATGTCCTCAAACATAAGATGATTGAGCAGCTGAAGAAGGAAATCTCGGCGATGAAGCTGATCAACCATCCAAACGTTGTAAGAATATTTGAGGTGATGGCAAGCAAAACAAAGATTTACATTGTTCTAGAGTTGGTTAATGGAGGAGAACTATTTGACAAAATTGCGAGATATGGAAGACTAAAAGAGGATGAGGCAAGAAGCTATTTTCAACAACTAATCAATGCAGTTGATTATTGCCATAGTAGAGGAGTTTATCATAGAGATTTGAAGCCTGAGAATCTTCTTCTGGACTCAAATGGTGTTCTTAAAGTTTCGGATTTTGGATTGAGTACTTACGCGCAGCGAGAGGATGAACTTCTTCGCACGGCATGTGGAACCCCGAATTATGTTGCTCCCGAGGTGATCAATGATAGAGGCTATGTTGGATCTGCATCTGATATATGGTCTTGTGGAGTCATTCTCTTTGTACTCATGGCTGGATACTTGCCTTTTGATGAACCAAATCAAATGGCACTTTACAAGAAAATTGAAAAGGCTCAATTCACATGTCCATCTTGGTTTTCGCCCGAGGCAAAAAAAATTCTGAAGCGAATTCTGGATCCAAATCCTCTCACAAGGATAAAAATTCCTGAACTCTTGAGAGATGAATGGTTTAGAAAAGGATACAAGCCACCAAGTTTTACAGAGGAAGAAGATGTAAATGTAGATGATGTAGCTGCTGCTTTTGATGATTCTAAGGAAAATCTAGTGACAGAGAGAAAAGAGAAACCGGTTTCAATGAATGCTTTTGAACTCATTTCAAGATCTCAAAGCTTTAACCTTGACAGCTTATTTGAGCAGCAAACAGGAGTTGTAAAGAGAGAAACACATTTTACTTCACAACATCCTCCGAACGAAATCATGTCGAAAATTGAGGAAGCTGCCAAGCCTCTTGGATTCAATGTTCACAAGCGAAATTATAAGATGAGGCTGCAAGGTGATAAGAGTGGAAGGAAAGGTCATCTTTCGGTGGCTACCGAGGTTTTCGAAGTGGCGCCCTCCTTGCACGTGGTGGAGCTGCGGAAAACCGGTGGCGATACACTGGAGTTTCACAAGTTCTACAAAAACTTCTCTTCAGGGTTGCAAGACATAGTTTGGCATACTGAAGAAAAAATTTGA 1356 0.424 MSSSKSNKKGGRGGGAPPPPRAPARTCVGKYELGKTIGEGSFAKVKFAKNVENGDHVAIKILDKSHVLKHKMIEQLKKEISAMKLINHPNVVRIFEVMASKTKIYIVLELVNGGELFDKIARYGRLKEDEARSYFQQLINAVDYCHSRGVYHRDLKPENLLLDSNGVLKVSDFGLSTYAQREDELLRTACGTPNYVAPEVINDRGYVGSASDIWSCGVILFVLMAGYLPFDEPNQMALYKKIEKAQFTCPSWFSPEAKKILKRILDPNPLTRIKIPELLRDEWFRKGYKPPSFTEEEDVNVDDVAAAFDDSKENLVTERKEKPVSMNAFELISRSQSFNLDSLFEQQTGVVKRETHFTSQHPPNEIMSKIEEAAKPLGFNVHKRNYKMRLQGDKSGRKGHLSVATEVFEVAPSLHVVELRKTGGDTLEFHKFYKNFSSGLQDIVWHTEEKI 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00409 451 CDD CIPK_C 327 440 - -
Adu02g00409 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Adu02g00409 451 SMART serkin_6 31 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g00409 451 Gene3D Phosphorylase Kinase; domain 1 22 110 - -
Adu02g00409 451 ProSitePatterns Protein kinases ATP-binding region signature. 37 60 IPR017441 GO:0005524
Adu02g00409 451 ProSiteProfiles Protein kinase domain profile. 31 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g00409 451 PANTHER - 24 448 - -
Adu02g00409 451 SUPERFAMILY Protein kinase-like (PK-like) 28 344 IPR011009 -
Adu02g00409 451 Gene3D Kinase associated domain 1, KA1 320 446 - -
Adu02g00409 451 Pfam Protein kinase domain 31 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g00409 451 ProSiteProfiles NAF domain profile. 321 345 IPR018451 GO:0007165
Adu02g00409 451 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 24 448 - -
Adu02g00409 451 MobiDBLite consensus disorder prediction 1 24 - -
Adu02g00409 451 Gene3D Transferase(Phosphotransferase) domain 1 111 311 - -
Adu02g00409 451 Pfam NAF domain 323 383 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00409 Adu-Chr2 4760416 4765173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00409 24 448 CBL-interacting serine-threonine protein kinases AT1G01140 75.463 0.0 687
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Adu02g00409 Pkinase 1.3e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00409 - - gmx:100794136 773.467