Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00406 ATGGAAGAGTTGATAATCTCACCTTCTTCATCTTCATCTCTAGTTTCTACCACAACTCCATCATCATCAACAACACAAATGCTTCAACAAAACCTTCAGTTCCTTCTCCAATCGCAACCAAGCTGGTGGGTCTACGCCATCTTCTGGAGCACCACGAAGGACGACAATGGCAACCTCTACCTAGCTTGGGGTGAAGGCCATTTCCAAGGCAACACCACCGAACACACCAAAACGCAACAACAACACAACCAAAACGACGCCGAATGGTTCTACGTCATGTCGTTGACCAGAACCTTCTCCATAGCAAACTCTTCCTCTTCTTCTCTACCCGGTAAAGCTTTTGCTTTGGGTTCAGTCCTTTGGCTCAACAGCAAAGAAGAGCTTCAATTCTATAACTGCGAGAGAGCCAAAGAAGCTCACGCTCACGGCATCGAAACCTTGATCTGTATTCCAACCTCAAACGGCGTCGTTGAGATGGGTTCTTACAACACCATCCCTCAGAACTGGAACCTCATCAACCATGTCAAGTCCGTCTTCGAAGACTCCATGGTCAACAACAACAACAATAACAATAACAATAACCACTGTAACAATAACAATCTCCACAACACCGTTCAGCAAATCTTCGAGGACAACGACGACTTTTCCTTCGCCGAGATCAGTTTCATGGCCGGTCTCGAAGAAGGCAGAGAACAAGTCATTTCACGAAAGCAGGCGGACGTAACCGTCGCTTTCAACAAAGAAAGCAAGGATTCGTACGCCGAGTCGGAGCACTCAGACTCCGACTGTCCGTTTCTGAAAACAGAAAACACTGAAAATAAAAACAAATCGGAAGCTCCAAAGAGCAAGAGAGGCAGGAAGCCGGTCCTCAACCGCGAAACGCCGGTGAATCACGTGGAGGCGGAGAGGCAACGGAGGGAGAAACTAAACCACCGATTCTACGCCTTGCGAGCGGTGGTTCCGAACGTTTCGAGGATGGACAAGGCTTCTTTATTGTCCGATGCCGTCGCTTACATCAACGAGTTGAAGGCCAAGATCAAAGATCTTGAATCCGAGAAAGATAACTATCAGCGCAAGAAAAAGGTGAAGCTCGAAACCGGTGACACTATGGACAATCAAAGCACGGTGACTAATTCCTCAACCGTAGTGGATCAAGAGAAATGTAGTAATGGCGTTGTTGCTGAGGTGGATGTGAAGATCATAGGGGACGATGCCATGGTTAGGGTTCAAAGTGAGAATGTGAATCACCCAGGTGCGAGACTCATGGGAGTATTGAGGGATATGGAGTTTCAAGTTCATCATGCTAGCATGACTTGCGTCAATGAATTAATGCTTCAAGATGTTGTTGGAAAAGTCCCCAATGGAATCTTCACAAGTGAAGAGGGTATTCGATCTGCTATTCTCATGAGGTTGGATCATTAA 1422 0.4669 MEELIISPSSSSSLVSTTTPSSSTTQMLQQNLQFLLQSQPSWWVYAIFWSTTKDDNGNLYLAWGEGHFQGNTTEHTKTQQQHNQNDAEWFYVMSLTRTFSIANSSSSSLPGKAFALGSVLWLNSKEELQFYNCERAKEAHAHGIETLICIPTSNGVVEMGSYNTIPQNWNLINHVKSVFEDSMVNNNNNNNNNNHCNNNNLHNTVQQIFEDNDDFSFAEISFMAGLEEGREQVISRKQADVTVAFNKESKDSYAESEHSDSDCPFLKTENTENKNKSEAPKSKRGRKPVLNRETPVNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVAYINELKAKIKDLESEKDNYQRKKKVKLETGDTMDNQSTVTNSSTVVDQEKCSNGVVAEVDVKIIGDDAMVRVQSENVNHPGARLMGVLRDMEFQVHHASMTCVNELMLQDVVGKVPNGIFTSEEGIRSAILMRLDH 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00406 473 MobiDBLite consensus disorder prediction 1 20 - -
Adu02g00406 473 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 293 359 IPR036638 GO:0046983
Adu02g00406 473 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 28 179 IPR025610 -
Adu02g00406 473 Coils Coil 332 366 - -
Adu02g00406 473 PANTHER MYC 1 471 IPR045084 GO:0003700|GO:0006355
Adu02g00406 473 Pfam Helix-loop-helix DNA-binding domain 297 342 IPR011598 GO:0046983
Adu02g00406 473 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 293 342 IPR011598 GO:0046983
Adu02g00406 473 MobiDBLite consensus disorder prediction 250 305 - -
Adu02g00406 473 CDD bHLH_AtAIB_like 292 365 - -
Adu02g00406 473 MobiDBLite consensus disorder prediction 249 305 - -
Adu02g00406 473 PANTHER TRANSCRIPTION FACTOR BHLH14 1 471 - -
Adu02g00406 473 SMART finulus 299 348 IPR011598 GO:0046983
Adu02g00406 473 Gene3D - 288 370 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00406 Adu-Chr2 4675710 4677643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00406 28 461 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G17880 33.583 2.78e-88 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu02g00406 bHLH-MYC_N 1.1e-43 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00406 - K13422 gmx:100795733 519.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g00406 02 4675710 4677643 Adu02g00406 02 4675710 4677643 ECH